Genome ID：GCA_001663795.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	29	38.29

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
EFLDGDLI_1	438066	438659	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
EFLDGDLI_1	311749	313209	STER_RS05320	0.0	Capsule	Immune modulation	99.86	100.00	WP_011681177
EFLDGDLI_1	438066	438659	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
EFLDGDLI_1	650713	651522	STU_RS16245	0.0	Capsule	Immune modulation	99.75	100.00	WP_002948020
EFLDGDLI_1	438659	439528	rfbA	0.0	Capsule	Immune modulation	99.66	100.00	WP_011681286
EFLDGDLI_1	438066	438659	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
EFLDGDLI_1	193107	194765	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
EFLDGDLI_1	651506	652462	STU_RS16250	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226328
EFLDGDLI_1	1206723	1207562	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
EFLDGDLI_1	646640	648424	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
EFLDGDLI_1	649508	650713	STU_RS16240	0.0	Capsule	Immune modulation	99.17	100.00	WP_011226326
EFLDGDLI_1	658649	659500	rfbD	0.0	Capsule	Immune modulation	99.06	100.00	WP_014621820
EFLDGDLI_1	311017	311748	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
EFLDGDLI_1	474852	475613	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
EFLDGDLI_1	652459	653607	STU_RS16255	0.0	Capsule	Immune modulation	98.78	100.00	WP_041828290
EFLDGDLI_1	311017	311748	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
EFLDGDLI_1	311017	311748	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
EFLDGDLI_1	379091	379884	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.24	100.25	-
EFLDGDLI_1	299585	301000	STER_RS05250	0.0	Capsule	Immune modulation	98.23	100.00	WP_011681165
EFLDGDLI_1	309566	310306	STU_RS14635	0.0	Capsule	Immune modulation	98.11	100.00	WP_011226046
EFLDGDLI_1	309566	310306	STER_RS05305	0.0	Capsule	Immune modulation	97.71	100.00	WP_011681174
EFLDGDLI_1	311749	313209	STU_RS14650	0.0	Capsule	Immune modulation	97.33	100.21	WP_011226049
EFLDGDLI_1	309571	310306	STR_RS05250	0.0	Capsule	Immune modulation	97.15	98.13	WP_011227246
EFLDGDLI_1	308142	309509	STU_RS14630	0.0	Capsule	Immune modulation	97.00	100.00	WP_011226045
EFLDGDLI_1	311749	313209	STR_RS05265	0.0	Capsule	Immune modulation	96.78	100.21	WP_041827043
EFLDGDLI_1	310316	311008	STR_RS05255	0.0	Capsule	Immune modulation	95.38	100.00	WP_011227247
EFLDGDLI_1	310316	311008	STU_RS14640	0.0	Capsule	Immune modulation	95.38	100.00	WP_011226047
EFLDGDLI_1	648421	649488	STU_RS16235	0.0	Capsule	Immune modulation	95.27	101.14	WP_002948022
EFLDGDLI_1	308144	309509	STER_RS05300	0.0	Capsule	Immune modulation	94.58	99.85	WP_011681173
EFLDGDLI_1	310316	311008	STER_RS05310	0.0	Capsule	Immune modulation	90.48	100.00	WP_011681175
EFLDGDLI_1	656272	657546	STU_RS16265	0.0	Capsule	Immune modulation	89.42	99.92	WP_011226331
EFLDGDLI_1	1770984	1772287	eno	0.0	Streptococcal enolase	Exoenzyme	88.02	99.46	WP_000022832
EFLDGDLI_1	945038	946048	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
EFLDGDLI_1	1308756	1310039	tig/ropA	0.0	Trigger factor	Stress survival	80.81	99.77	WP_000107753
EFLDGDLI_1	436591	437637	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
EFLDGDLI_1	297182	297765	SPD_RS01775	1.09e-151	Capsule	Immune modulation	83.59	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
EFLDGDLI_1	478300	479283	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
EFLDGDLI_1	33469	34542	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
EFLDGDLI_1	822057	824360	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
EFLDGDLI_1	1687346	1688314	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
EFLDGDLI_1	61789	64035	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
EFLDGDLI_1	548612	550093	SPD_0310	0.0	UPF0371 protein SPD_0310	91.70	100.00	ABJ54480
EFLDGDLI_1	1226354	1227352	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
EFLDGDLI_1	1190240	1191211	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
EFLDGDLI_1	708040	706889	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.06	99.74	AAL00050
EFLDGDLI_1	672677	670689	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
EFLDGDLI_1	462101	460371	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
EFLDGDLI_1	1152076	1150598	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
EFLDGDLI_1	1770984	1772285	Eno	0.0	enolase	86.21	99.77	ABP90468
EFLDGDLI_1	1136887	1134995	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
EFLDGDLI_1	66960	65251	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
EFLDGDLI_1	988435	989445	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
EFLDGDLI_1	216619	215258	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
EFLDGDLI_1	1038778	1036886	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
EFLDGDLI_1	1756548	1757438	bglB	5.26e-178	putative phospho--glucosidase	88.55	99.66	AAK33487
EFLDGDLI_1	138010	137072	SP_0676	2.36e-167	transcription facot	81.15	97.20	AAK74821
EFLDGDLI_1	64227	65084	metF	1.53e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
EFLDGDLI_1	351411	350707	covR	4.39e-131	responder protein	85.53	100.00	AAK71319
EFLDGDLI_1	529637	528966	rr01	3.01e-124	response regulator	83.93	99.56	CAB54566
EFLDGDLI_1	351411	350707	walR	1.85e-121	DNA-binding response regulator	82.13	100.00	ANC99504
EFLDGDLI_1	1463209	1463895	CovR	1.01e-117	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
EFLDGDLI_1	70914	71582	CiaR	2.02e-117	two-component response regulator	84.31	99.55	AAK74935
EFLDGDLI_1	70914	71585	ciaR	1.99e-115	two component system response regulator	82.14	99.12	AIK75708
EFLDGDLI_1	1227628	1228002	SpxA2	1.16e-69	transcriptional regulator	91.20	94.70	ERL21461
EFLDGDLI_1	227981	228382	SpxA1	3.77e-66	transcriptional regulator	80.60	100.00	ERL19273
EFLDGDLI_1	1310197	1310697	RopE (M5005_Spy_1611)	4.93e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
EFLDGDLI_1	822057	824354	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
EFLDGDLI_1	1024319	1023300	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451