Genome ID:GCA_001685375.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 27 | 43.42 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FFJEJNBP_1 | 865148 | 865987 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| FFJEJNBP_1 | 1661804 | 1662594 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 100.00 | 100.00 | - |
| FFJEJNBP_1 | 1390015 | 1390866 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| FFJEJNBP_1 | 1579177 | 1579938 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| FFJEJNBP_1 | 1737882 | 1738805 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| FFJEJNBP_1 | 1736972 | 1737922 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| FFJEJNBP_1 | 1735865 | 1736947 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| FFJEJNBP_1 | 1734801 | 1735775 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| FFJEJNBP_1 | 1734316 | 1734795 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| FFJEJNBP_1 | 1733005 | 1734123 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| FFJEJNBP_1 | 1731478 | 1732437 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827042 |
| FFJEJNBP_1 | 1730715 | 1731314 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| FFJEJNBP_1 | 1729829 | 1730578 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| FFJEJNBP_1 | 1729127 | 1729819 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227247 |
| FFJEJNBP_1 | 1728387 | 1729118 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| FFJEJNBP_1 | 1726932 | 1728386 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827043 |
| FFJEJNBP_1 | 1615947 | 1616540 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| FFJEJNBP_1 | 1401599 | 1403344 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| FFJEJNBP_1 | 1398677 | 1399879 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227428 |
| FFJEJNBP_1 | 1397871 | 1398677 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| FFJEJNBP_1 | 1396930 | 1397871 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| FFJEJNBP_1 | 1395785 | 1396933 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| FFJEJNBP_1 | 1741928 | 1742986 | waaB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_157822584 |
| FFJEJNBP_1 | 51013 | 52671 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| FFJEJNBP_1 | 1399897 | 1401597 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 99.94 | 100.00 | WP_041827077 |
| FFJEJNBP_1 | 1738813 | 1740234 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| FFJEJNBP_1 | 1615947 | 1616540 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| FFJEJNBP_1 | 1615947 | 1616540 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| FFJEJNBP_1 | 1399897 | 1401597 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_041827753 |
| FFJEJNBP_1 | 1397871 | 1398677 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| FFJEJNBP_1 | 1396930 | 1397871 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| FFJEJNBP_1 | 1398677 | 1399879 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011681436 |
| FFJEJNBP_1 | 1729127 | 1729819 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226047 |
| FFJEJNBP_1 | 1395785 | 1396933 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| FFJEJNBP_1 | 1615078 | 1615947 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| FFJEJNBP_1 | 1728387 | 1729118 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| FFJEJNBP_1 | 1729829 | 1730564 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| FFJEJNBP_1 | 1728387 | 1729118 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| FFJEJNBP_1 | 1401599 | 1403344 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| FFJEJNBP_1 | 1729829 | 1730564 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| FFJEJNBP_1 | 1726932 | 1728386 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_011226049 |
| FFJEJNBP_1 | 1390987 | 1392246 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| FFJEJNBP_1 | 1726932 | 1728386 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.92 | 99.79 | WP_011681177 |
| FFJEJNBP_1 | 1729127 | 1729819 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011681175 |
| FFJEJNBP_1 | 318377 | 319680 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| FFJEJNBP_1 | 1109283 | 1110293 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| FFJEJNBP_1 | 1397871 | 1398677 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| FFJEJNBP_1 | 765136 | 766419 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| FFJEJNBP_1 | 1616969 | 1618015 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| FFJEJNBP_1 | 1392243 | 1392941 | STER_RS07095 | 2.92e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| FFJEJNBP_1 | 1732493 | 1732729 | STR_RS05235* | 6.59e-119 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| FFJEJNBP_1 | 1393295 | 1393761 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| FFJEJNBP_1 | 1398677 | 1399414 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FFJEJNBP_1 | 1576490 | 1575507 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| FFJEJNBP_1 | 207107 | 206034 | MntE | 0.0 | manganese homeostasis | 94.13 | 99.72 | ABF32167 |
| FFJEJNBP_1 | 401916 | 400948 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| FFJEJNBP_1 | 1228681 | 1226378 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| FFJEJNBP_1 | 1489629 | 1488148 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| FFJEJNBP_1 | 178426 | 176180 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| FFJEJNBP_1 | 846356 | 845364 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| FFJEJNBP_1 | 882469 | 881498 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| FFJEJNBP_1 | 1342512 | 1343663 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| FFJEJNBP_1 | 1376985 | 1378967 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| FFJEJNBP_1 | 1592684 | 1594414 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| FFJEJNBP_1 | 920729 | 922207 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| FFJEJNBP_1 | 319680 | 318379 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| FFJEJNBP_1 | 935465 | 937357 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| FFJEJNBP_1 | 173255 | 174964 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| FFJEJNBP_1 | 1068602 | 1067592 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| FFJEJNBP_1 | 1018271 | 1020163 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| FFJEJNBP_1 | 334110 | 333220 | bglB | 2.82e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| FFJEJNBP_1 | 113856 | 114791 | SP_0676 | 7.14e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| FFJEJNBP_1 | 175988 | 175131 | metF | 8.36e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| FFJEJNBP_1 | 1690294 | 1690998 | covR | 3.39e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| FFJEJNBP_1 | 1523308 | 1523979 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| FFJEJNBP_1 | 1690294 | 1690998 | walR | 2.43e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| FFJEJNBP_1 | 614992 | 614306 | CovR | 9.73e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| FFJEJNBP_1 | 169302 | 168652 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| FFJEJNBP_1 | 169302 | 168652 | ciaR | 6.89e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| FFJEJNBP_1 | 845067 | 844672 | SpxA2 | 3.58e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| FFJEJNBP_1 | 764978 | 764478 | RopE (M5005_Spy_1611) | 9.55e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| FFJEJNBP_1 | 1228681 | 1226384 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| FFJEJNBP_1 | 1032732 | 1033751 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |