Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 1 | 0 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHKCMDBM_13 | 87333 | 89258 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
| GHKCMDBM_20 | 75912 | 76814 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
| GHKCMDBM_20 | 13764 | 14498 | ErmG | ARO:3000522 | ErmG | 98.77 | 100.00 | L42817.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GHKCMDBM_13 | 87333 | 89258 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| GHKCMDBM_20 | 75912 | 76814 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | U05887 |
| GHKCMDBM_20 | 13764 | 14498 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.18 | 100.00 | M15332 |
| GHKCMDBM_20 | 11529 | 12992 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| GHKCMDBM_20 | 10189 | 11403 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GHKCMDBM_13 | 87333 | 89255 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| GHKCMDBM_20 | 75915 | 76814 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005816369.1 |
| GHKCMDBM_20 | 13764 | 14495 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.18 | 100.00 | WP_063844791.1 |
| GHKCMDBM_20 | 11529 | 12989 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| GHKCMDBM_20 | 10189 | 11412 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GHKCMDBM_27 | 55915 | 57108 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 100.00 | 100.00 | BAA77277 |
| GHKCMDBM_27 | 55915 | 57108 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 96.90 | 100.00 | BAA77275 |
| GHKCMDBM_27 | 55915 | 57108 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 94.89 | 100.00 | BAA77276 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||