Genome ID:GCA_001705195.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3234.69

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ANBMDGDF_1542616543665clbAARO:3002814clbA92.55100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ANBMDGDF_1542616543665cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.14100.00KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ANBMDGDF_1542616543662clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.55100.00WP_012116915.1
ANBMDGDF_1540238540756satAstreptothricin N-acetyltransferase SatABLASTX83.24100.00WP_003242546.1
ANBMDGDF_117561111758708rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.83100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
ANBMDGDF_132183053219486capB0.0CapsuleImmune modulation82.1299.66NP_391471
ANBMDGDF_132178413218290capC1.37e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ANBMDGDF_1133481134617tufA0.0elongation factor Tu86.5495.69AHM69299
ANBMDGDF_11872219591pdxS5.61e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
ANBMDGDF_115408721541648CodY3.05e-124nutrient-responsive regulator81.08100.00ACJ80679
ANBMDGDF_116218801622914rny (EF3170)9.26e-166RNase Y81.4566.60AAO82844