Genome ID：GCA_001750745.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
14	10	4	17.66

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LCKAGGKD_1	3045800	3046582	ANT(9)-Ia	ARO:3002630	ANT(9)-Ia	100.00	100.00	X02588.1
LCKAGGKD_1	2735674	2736528	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
LCKAGGKD_1	2716965	2718167	blt	ARO:3003006	blt	100.00	100.00	L32599.1
LCKAGGKD_1	2494647	2495816	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LCKAGGKD_1	1376847	1377164	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
LCKAGGKD_1	1376509	1376847	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LCKAGGKD_1	916767	919337	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
LCKAGGKD_1	604724	606367	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
LCKAGGKD_1	339155	339748	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LCKAGGKD_1	288652	290085	lmrB	ARO:3002813	lmrB	100.00	100.00	JYFL01000006.1
LCKAGGKD_1	275837	276757	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LCKAGGKD_1	2735674	2736528	aadK	Streptomycin	100.00	100.00	M26879
LCKAGGKD_1	3045800	3046582	ant(9)-Ia	Spectinomycin	100.00	100.00	X02588
LCKAGGKD_1	275837	276757	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
LCKAGGKD_1	4190020	4191396	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LCKAGGKD_1	2735677	2736528	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
LCKAGGKD_1	3045803	3046582	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	EXACTX	100.00	100.00	WP_000067268.1
LCKAGGKD_1	275837	276754	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
LCKAGGKD_1	4187502	4188020	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
LCKAGGKD_1	4190023	4191396	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
LCKAGGKD_1	604727	606367	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
LCKAGGKD_1	2051327	2053921	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LCKAGGKD_1	3700159	3701301	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
LCKAGGKD_1	3701784	3702965	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
LCKAGGKD_1	3701320	3701769	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
LCKAGGKD_1	2004669	2006432	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
LCKAGGKD_1	3293849	3294634	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
LCKAGGKD_1	3290013	3290951	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
LCKAGGKD_1	3292627	3293823	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
LCKAGGKD_1	3290979	3292598	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
LCKAGGKD_1	3282857	3289993	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
LCKAGGKD_1	2295295	2295936	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LCKAGGKD_1	132882	134018	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LCKAGGKD_1	19074	19943	pdxS	3.13e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LCKAGGKD_1	1690111	1690887	CodY	3.42e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
LCKAGGKD_1	3548572	3549141	ClpP	2.54e-98	part of proteolytic complex	81.05	97.44	BAB94595