Genome ID:GCA_001870065.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 5 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HCIEDONB_1 | 2071058 | 2072258 | mef(A) | Erythromycin, Azithromycin | 94.75 | 98.60 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HCIEDONB_1 | 2071055 | 2072257 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.75 | 98.28 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HCIEDONB_1 | 2981757 | 2982908 | tufA | 0.0 | elongation factor Tu | 86.46 | 97.21 | AHM69299 |
| HCIEDONB_1 | 2929993 | 2930862 | pdxS | 3.44e-150 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HCIEDONB_1 | 628802 | 629578 | CodY | 7.78e-127 | nutrient-responsive regulator | 81.85 | 100.00 | ACJ80679 |
| HCIEDONB_1 | 628802 | 629578 | codY | 2.52e-123 | global regulator and isoleucine sensor | 80.69 | 100.00 | ASW39076 |
| HCIEDONB_1 | 230835 | 230266 | ClpP | 1.54e-102 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| HCIEDONB_1 | 2817875 | 2817189 | WalR | 4.54e-102 | transcriptional regulatory protein | 80.79 | 97.44 | EPH95667 |