Genome ID:GCA_001890405.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 3 | 14.46 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HPJIAKHA_1 | 3986161 | 3987807 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| HPJIAKHA_1 | 3717038 | 3717631 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| HPJIAKHA_1 | 3667987 | 3669420 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.00 | JYFL01000006.1 |
| HPJIAKHA_1 | 3655172 | 3656092 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| HPJIAKHA_1 | 1772345 | 1773199 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| HPJIAKHA_1 | 1755248 | 1756450 | blt | ARO:3003006 | blt | 98.00 | 100.00 | L32599.1 |
| HPJIAKHA_1 | 649045 | 649362 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| HPJIAKHA_1 | 648707 | 649045 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| HPJIAKHA_1 | 157183 | 159753 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HPJIAKHA_1 | 1772345 | 1773199 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| HPJIAKHA_1 | 3655172 | 3656092 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HPJIAKHA_1 | 3655172 | 3656080 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| HPJIAKHA_1 | 1772348 | 1773199 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| HPJIAKHA_1 | 3986164 | 3987807 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| HPJIAKHA_1 | 3352803 | 3353321 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HPJIAKHA_1 | 2844584 | 2845765 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| HPJIAKHA_1 | 2330239 | 2331024 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| HPJIAKHA_1 | 2842959 | 2844101 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| HPJIAKHA_1 | 2319247 | 2326383 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.30 | 100.00 | NP_391076 |
| HPJIAKHA_1 | 1229379 | 1231142 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| HPJIAKHA_1 | 2326403 | 2327341 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.04 | 100.00 | NP_391077 |
| HPJIAKHA_1 | 2329017 | 2330213 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| HPJIAKHA_1 | 1360284 | 1360925 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| HPJIAKHA_1 | 2844120 | 2844569 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| HPJIAKHA_1 | 2327369 | 2328988 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HPJIAKHA_1 | 3516957 | 3518093 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| HPJIAKHA_1 | 3403140 | 3404009 | pdxS | 5.38e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| HPJIAKHA_1 | 2687208 | 2687777 | ClpP | 2.49e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |