Genome ID:GCA_001922005.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3245.39

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
MCKBDDEF_119420251943074clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
MCKBDDEF_119420391943074cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.6198.67KR610408
MCKBDDEF_138576003858976tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.8799.93X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
MCKBDDEF_119420281943074clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
MCKBDDEF_138576003858970tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.3199.78WP_003242953.1
MCKBDDEF_138568693857387satAstreptothricin N-acetyltransferase SatABLASTX80.35100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
MCKBDDEF_129631322964313capB0.0CapsuleImmune modulation82.2199.66NP_391471
MCKBDDEF_129643282964777capC1.46e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MCKBDDEF_123435032342367tufA0.0elongation factor Tu86.8195.69AHM69299
MCKBDDEF_124582922457423pdxS3.28e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
MCKBDDEF_1861892861116CodY4.65e-124nutrient-responsive regulator81.08100.00ACJ80679
MCKBDDEF_133412723342144lipA (SAUSA300_0829)1.26e-161lipoic acid synthetase80.8295.41ABD22039