Genome ID:GCA_002055965.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HDNLBCCK_1 | 2735700 | 2736554 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| HDNLBCCK_1 | 2716993 | 2718195 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| HDNLBCCK_1 | 2494678 | 2495847 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| HDNLBCCK_1 | 1376887 | 1377204 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| HDNLBCCK_1 | 1376549 | 1376887 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| HDNLBCCK_1 | 916816 | 919386 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| HDNLBCCK_1 | 604777 | 606420 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| HDNLBCCK_1 | 339199 | 339792 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| HDNLBCCK_1 | 288697 | 290130 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| HDNLBCCK_1 | 275882 | 276802 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HDNLBCCK_1 | 2735700 | 2736554 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| HDNLBCCK_1 | 275882 | 276802 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| HDNLBCCK_1 | 4187720 | 4189096 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HDNLBCCK_1 | 2735703 | 2736554 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| HDNLBCCK_1 | 275882 | 276799 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| HDNLBCCK_1 | 4185202 | 4185720 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| HDNLBCCK_1 | 4187723 | 4189096 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| HDNLBCCK_1 | 604780 | 606420 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| HDNLBCCK_1 | 2051367 | 2053961 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HDNLBCCK_1 | 3697859 | 3699001 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| HDNLBCCK_1 | 3699484 | 3700665 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| HDNLBCCK_1 | 3699020 | 3699469 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| HDNLBCCK_1 | 2004709 | 2006472 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| HDNLBCCK_1 | 3291526 | 3292311 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| HDNLBCCK_1 | 3287690 | 3288628 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| HDNLBCCK_1 | 3290304 | 3291500 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| HDNLBCCK_1 | 3288656 | 3290275 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| HDNLBCCK_1 | 3280534 | 3287670 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| HDNLBCCK_1 | 2295334 | 2295975 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HDNLBCCK_1 | 132918 | 134054 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| HDNLBCCK_1 | 19112 | 19981 | pdxS | 3.13e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HDNLBCCK_1 | 1690150 | 1690926 | CodY | 5.93e-124 | nutrient-responsive regulator | 80.69 | 100.00 | ACJ80679 |
| HDNLBCCK_1 | 3546248 | 3546817 | ClpP | 2.54e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |