Genome ID:GCA_002055965.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HDNLBCCK_127357002736554aadKARO:3002627aadK100.00100.00AL009126.1
HDNLBCCK_127169932718195bltARO:3003006blt100.00100.00L32599.1
HDNLBCCK_124946782495847bmrARO:3003007bmr99.74100.00M33768.1
HDNLBCCK_113768871377204ykkDARO:3003064ykkD100.00100.00AL009126.1
HDNLBCCK_113765491376887ykkCARO:3003063ykkC100.00100.00AL009126.1
HDNLBCCK_1916816919386Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
HDNLBCCK_1604777606420vmlRARO:3004476vmlR100.00100.00NC_000964.3
HDNLBCCK_1339199339792tmrBARO:3003059tmrB100.00100.00AL009126.3
HDNLBCCK_1288697290130lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
HDNLBCCK_1275882276802mphKARO:3004541mphK100.00100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HDNLBCCK_127357002736554aadKStreptomycin100.00100.00M26879
HDNLBCCK_1275882276802mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
HDNLBCCK_141877204189096tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HDNLBCCK_127357032736554aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
HDNLBCCK_1275882276799mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
HDNLBCCK_141852024185720satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
HDNLBCCK_141877234189096tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
HDNLBCCK_1604780606420vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
HDNLBCCK_120513672053961rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HDNLBCCK_136978593699001capA0.0CapsuleImmune modulation100.00100.00NP_391469
HDNLBCCK_136994843700665capB0.0CapsuleImmune modulation100.00100.00NP_391471
HDNLBCCK_136990203699469capC0.0CapsuleImmune modulation100.00100.00NP_391470
HDNLBCCK_120047092006472dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
HDNLBCCK_132915263292311dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
HDNLBCCK_132876903288628dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
HDNLBCCK_132903043291500dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
HDNLBCCK_132886563290275dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
HDNLBCCK_132805343287670dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
HDNLBCCK_122953342295975hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HDNLBCCK_1132918134054tufA0.0elongation factor Tu84.9695.69AHM69299
HDNLBCCK_11911219981pdxS3.13e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
HDNLBCCK_116901501690926CodY5.93e-124nutrient-responsive regulator80.69100.00ACJ80679
HDNLBCCK_135462483546817ClpP2.54e-98part of proteolytic complex81.0597.44BAB94595