Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 2 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LODAJPPA_39 | 11494 | 13419 | tet(M) | ARO:3000186 | tet(M) | 99.06 | 100.31 | AB039845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LODAJPPA_39 | 11494 | 13419 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.58 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LODAJPPA_39 | 11497 | 13419 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.69 | 100.00 | WP_000691727.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LODAJPPA_12 | 36749 | 37456 | WalR | 1.45e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| LODAJPPA_18 | 95597 | 95400 | CspR | 4.52e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| LODAJPPA_18 | 95597 | 95403 | CspA | 2.20e-27 | cold shock protein | 81.54 | 98.48 | CAA62903 |