Genome ID:GCA_002094975.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 20 | 31 | 36.89 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CMAHBEIB_1 | 1743423 | 1744154 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 94.54 | 100.00 | WP_011227248 |
| CMAHBEIB_1 | 1049402 | 1050253 | rfbD | 0.0 | Capsule | Immune modulation | 94.13 | 100.00 | WP_014621820 |
| CMAHBEIB_1 | 1743423 | 1744154 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 93.85 | 100.00 | WP_011226048 |
| CMAHBEIB_1 | 1743423 | 1744154 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 93.58 | 100.00 | WP_011681176 |
| CMAHBEIB_1 | 1052515 | 1053324 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 92.85 | 99.88 | WP_002948020 |
| CMAHBEIB_1 | 1055581 | 1057337 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 92.60 | 98.43 | WP_011226325 |
| CMAHBEIB_1 | 1053324 | 1054529 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 92.29 | 100.00 | WP_011226326 |
| CMAHBEIB_1 | 1051575 | 1052531 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 91.85 | 100.00 | WP_011226328 |
| CMAHBEIB_1 | 1050430 | 1051578 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 91.57 | 99.83 | WP_041828290 |
| CMAHBEIB_1 | 1892107 | 1892700 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 91.08 | 100.00 | WP_011226149 |
| CMAHBEIB_1 | 1054550 | 1055584 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 91.00 | 99.15 | WP_002948022 |
| CMAHBEIB_1 | 1892107 | 1892700 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 90.91 | 100.00 | WP_011226149 |
| CMAHBEIB_1 | 1892107 | 1892700 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 90.91 | 100.00 | WP_011226149 |
| CMAHBEIB_1 | 1744155 | 1745615 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 90.85 | 99.86 | WP_011681177 |
| CMAHBEIB_1 | 1637229 | 1638887 | fbp54 | 0.0 | FBPs | Adherence | 90.72 | 99.94 | WP_011227179 |
| CMAHBEIB_1 | 1744155 | 1745615 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 90.58 | 100.00 | WP_011226049 |
| CMAHBEIB_1 | 1744155 | 1745615 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_041827043 |
| CMAHBEIB_1 | 1742722 | 1743414 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011226047 |
| CMAHBEIB_1 | 967823 | 968662 | cbpD | 0.0 | Autolysin | Exoenzyme | 89.77 | 99.88 | WP_011226733 |
| CMAHBEIB_1 | 1742722 | 1743414 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011227247 |
| CMAHBEIB_1 | 1742722 | 1743414 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011681175 |
| CMAHBEIB_1 | 2074370 | 2075673 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.24 | 99.54 | WP_000022832 |
| CMAHBEIB_1 | 321184 | 322197 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 85.57 | 99.90 | WP_002986042 |
| CMAHBEIB_1 | 1475209 | 1475970 | srtA | 0.0 | Sortase A | Exoenzyme | 83.88 | 99.87 | - |
| CMAHBEIB_1 | 1890791 | 1891837 | rfbB | 0.0 | Capsule | Immune modulation | 80.90 | 100.00 | WP_009659423 |
| CMAHBEIB_1 | 673890 | 675173 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.76 | 99.61 | WP_000107753 |
| CMAHBEIB_1 | 1892700 | 1893569 | rfbA | 0.0 | Capsule | Immune modulation | 80.16 | 99.77 | WP_002904719 |
| CMAHBEIB_1 | 1742042 | 1742712 | STU_RS14635 | 2.79e-148 | Capsule | Immune modulation | 81.13 | 90.28 | WP_011226046 |
| CMAHBEIB_1 | 1742042 | 1742712 | STER_RS05305 | 1.30e-146 | Capsule | Immune modulation | 80.98 | 90.28 | WP_011681174 |
| CMAHBEIB_1 | 1742042 | 1742712 | STR_RS05250 | 1.32e-136 | Capsule | Immune modulation | 80.09 | 89.20 | WP_011227246 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CMAHBEIB_1 | 1472519 | 1471536 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 96.95 | 100.00 | AAK75326 |
| CMAHBEIB_1 | 1484104 | 1485177 | MntE | 0.0 | manganese homeostasis | 95.81 | 99.72 | ABF32167 |
| CMAHBEIB_1 | 191166 | 193469 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 94.40 | 99.10 | AAK74619 |
| CMAHBEIB_1 | 1302838 | 1301357 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 93.32 | 100.00 | ABJ54480 |
| CMAHBEIB_1 | 2171240 | 2170272 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| CMAHBEIB_1 | 1503647 | 1505893 | metE | 0.0 | methionine biosynthesis enzymes | 92.52 | 100.00 | AAK74738 |
| CMAHBEIB_1 | 567583 | 568554 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 91.67 | 100.00 | ABF36968 |
| CMAHBEIB_1 | 1405875 | 1412348 | PrtA | 0.0 | serine protease | 91.39 | 100.61 | ABJ55268 |
| CMAHBEIB_1 | 1920119 | 1918389 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 89.95 | 100.00 | AAK34199 |
| CMAHBEIB_1 | 58937 | 57786 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.58 | 99.74 | AAL00050 |
| CMAHBEIB_1 | 1037200 | 1039188 | uvrB | 0.0 | excinuclease ABC, B subunit | 89.44 | 100.00 | AE014259_2 |
| CMAHBEIB_1 | 532169 | 530691 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.83 | 100.00 | ADE32434 |
| CMAHBEIB_1 | 2075673 | 2074372 | Eno | 0.0 | enolase | 86.44 | 99.77 | ABP90468 |
| CMAHBEIB_1 | 516389 | 514497 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.58 | 98.90 | ABP91129 |
| CMAHBEIB_1 | 603588 | 604679 | recA | 0.0 | DNA recombination and repair | 84.91 | 95.36 | AAL00560 |
| CMAHBEIB_1 | 1508811 | 1507102 | PGM | 0.0 | phosphoglucomutase | 84.76 | 99.65 | ACH87041 |
| CMAHBEIB_1 | 1652815 | 1651454 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.89 | 99.56 | ABP90420 |
| CMAHBEIB_1 | 372880 | 373890 | pdh | 0.0 | pyruvate dehydrogenase | 82.79 | 99.70 | ABP91006 |
| CMAHBEIB_1 | 2090084 | 2089194 | bglB | 2.19e-175 | putative phospho--glucosidase | 86.87 | 99.66 | AAK33487 |
| CMAHBEIB_1 | 1552050 | 1551100 | SP_0676 | 3.25e-169 | transcription facot | 81.39 | 98.45 | AAK74821 |
| CMAHBEIB_1 | 1506083 | 1506940 | metF | 9.54e-168 | methionine biosynthesis enzymes | 87.06 | 99.31 | AAK74739 |
| CMAHBEIB_1 | 1956980 | 1957837 | mtsA | 6.30e-151 | substrate-binding lipoprotein of manganese transporter | 80.49 | 92.86 | AIK76191 |
| CMAHBEIB_1 | 1779409 | 1778705 | covR | 9.81e-126 | responder protein | 85.53 | 100.00 | AAK71319 |
| CMAHBEIB_1 | 1382068 | 1382739 | rr01 | 6.01e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| CMAHBEIB_1 | 1513476 | 1514147 | ciaR | 9.82e-124 | two component system response regulator | 85.71 | 99.12 | AIK75708 |
| CMAHBEIB_1 | 1513476 | 1514144 | CiaR | 1.22e-123 | two-component response regulator | 87.00 | 99.55 | AAK74935 |
| CMAHBEIB_1 | 821525 | 822211 | CovR | 1.85e-119 | serves to repress GAS virulence factor-encoding genes | 82.10 | 100.00 | ACE75886 |
| CMAHBEIB_1 | 1779409 | 1778705 | walR | 2.23e-119 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| CMAHBEIB_1 | 605940 | 606335 | SpxA2 | 2.17e-74 | transcriptional regulator | 91.67 | 100.00 | ERL21461 |
| CMAHBEIB_1 | 1664272 | 1664673 | SpxA1 | 1.40e-68 | transcriptional regulator | 82.09 | 100.00 | ERL19273 |
| CMAHBEIB_1 | 654528 | 654941 | GrpE | 1.71e-66 | protein grpE | 81.88 | 80.59 | ABP89267 |
| CMAHBEIB_1 | 675340 | 675831 | RopE (M5005_Spy_1611) | 1.07e-71 | probable DNA-directed RNA polymerase subunit delta | 82.93 | 85.86 | AAK34603 |
| CMAHBEIB_1 | 191166 | 193466 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 83.22 | 98.08 | MYN69560 |
| CMAHBEIB_1 | 410852 | 409833 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 85.88 | 100.00 | ABJ55451 |