Genome ID:GCA_002128705.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPBMILCE_86 | 13644 | 15071 | fexA | ARO:3002704 | fexA | 97.47 | 100.00 | AJ549214.1 |
| GPBMILCE_111 | 2132 | 2884 | ErmB | ARO:3000375 | ErmB | 98.78 | 100.81 | AF242872.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GPBMILCE_111 | 2132 | 2884 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.60 | 100.00 | AF080450 |
| GPBMILCE_86 | 13644 | 15071 | fexA | Chloramphenicol, Florfenicol | 99.16 | 100.00 | AJ549214 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPBMILCE_111 | 2132 | 2881 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 98.40 | 100.00 | WP_011018369.1 |
| GPBMILCE_86 | 13644 | 15068 | fexA | chloramphenicol/florfenicol efflux MFS transporter FexA | BLASTX | 97.47 | 100.00 | WP_015585966.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GPBMILCE_103 | 42070 | 42264 | CspA | 9.76e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |