Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LMDHPJAF_41 | 52626 | 53120 | lnuC | ARO:3002837 | lnuC | 97.56 | 100.00 | AY928180.1 |
| LMDHPJAF_12 | 5547 | 7466 | tet(W) | ARO:3000194 | tet(W) | 97.03 | 100.00 | AJ222769.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LMDHPJAF_41 | 52626 | 53120 | lnu(C) | Lincomycin | 98.99 | 100.00 | AY928180 |
| LMDHPJAF_12 | 5547 | 7466 | tet(W) | Doxycycline, Tetracycline, Minocycline | 98.96 | 100.00 | FN396364 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LMDHPJAF_12 | 5547 | 7463 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.53 | 100.00 | WP_000691721.1 |
| LMDHPJAF_41 | 52629 | 53120 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 97.56 | 100.00 | WP_063851341.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||