Genome ID:GCA_002202055.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NHIGOLGF_1 | 2559437 | 2560291 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| NHIGOLGF_1 | 2540683 | 2541885 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| NHIGOLGF_1 | 2319391 | 2320560 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| NHIGOLGF_1 | 1337860 | 1338177 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| NHIGOLGF_1 | 1337522 | 1337860 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| NHIGOLGF_1 | 874301 | 876871 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| NHIGOLGF_1 | 582924 | 584567 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| NHIGOLGF_1 | 331025 | 331618 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| NHIGOLGF_1 | 280504 | 281937 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| NHIGOLGF_1 | 267691 | 268611 | mphK | ARO:3004541 | mphK | 99.02 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NHIGOLGF_1 | 267691 | 268611 | mph(K) | Spiramycin, Telithromycin | 99.35 | 100.00 | NC_000964 |
| NHIGOLGF_1 | 2559437 | 2560291 | aadK | Streptomycin | 98.71 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NHIGOLGF_1 | 267691 | 268608 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.02 | 100.00 | WP_003246254.1 |
| NHIGOLGF_1 | 2559440 | 2560291 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| NHIGOLGF_1 | 582927 | 584567 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| NHIGOLGF_1 | 4036193 | 4036711 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
| NHIGOLGF_1 | 2023883 | 2026480 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.65 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NHIGOLGF_1 | 3543101 | 3544282 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| NHIGOLGF_1 | 3120258 | 3121043 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| NHIGOLGF_1 | 2122082 | 2122723 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| NHIGOLGF_1 | 3119036 | 3120232 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| NHIGOLGF_1 | 1969639 | 1971402 | dep/capD | 0.0 | Capsule | Immune modulation | 99.32 | 100.00 | NP_389723 |
| NHIGOLGF_1 | 3542637 | 3543086 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| NHIGOLGF_1 | 3541476 | 3542618 | capA | 0.0 | Capsule | Immune modulation | 98.78 | 100.00 | NP_391469 |
| NHIGOLGF_1 | 3109266 | 3116402 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.74 | 100.00 | NP_391076 |
| NHIGOLGF_1 | 3116422 | 3117360 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.40 | 100.00 | NP_391077 |
| NHIGOLGF_1 | 3117388 | 3119007 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NHIGOLGF_1 | 132105 | 133241 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| NHIGOLGF_1 | 18614 | 19483 | pdxS | 3.02e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| NHIGOLGF_1 | 1647700 | 1648476 | CodY | 3.30e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| NHIGOLGF_1 | 3383846 | 3384415 | ClpP | 2.44e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |