Genome ID:GCA_002218885.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4004.00

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PCBEPFIF_592324625168tet(W)ARO:3000194tet(W)96.55100.16AJ222769.3
PCBEPFIF_5634934137ErmTARO:3000595ErmT98.5787.70M64090.1
PCBEPFIF_921232767vatEARO:3002844vatE97.20100.00AF242872.1
PCBEPFIF_2620092494lnuAARO:3002835lnuA96.89100.00M14039.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PCBEPFIF_5635034138erm(T)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.3786.39AF310974
PCBEPFIF_592325525168tet(W)Doxycycline, Tetracycline, Minocycline98.8599.69FN396364
PCBEPFIF_2620092494lnu(A)Lincomycin98.35100.00M14039
PCBEPFIF_921232767vat(E)Dalfopristin, Pristinamycin IIA, Virginiamycin M96.43100.00AJ488494

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PCBEPFIF_921232764vat(E)streptogramin A O-acetyltransferase Vat(E)BLASTX99.53100.00WP_063856929.1
PCBEPFIF_2620122494lnu(A)lincosamide nucleotidyltransferase Lnu(A)BLASTX99.38100.00WP_001829870.1
PCBEPFIF_592325525168tet(W)tetracycline resistance ribosomal protection protein Tet(W)BLASTX99.3799.84WP_000691721.1
PCBEPFIF_5635084137erm(T)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)PARTIAL_CONTIG_ENDX98.5786.07WP_002345002.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found