Genome ID：GCA_002224045.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
4	2	6	7.48

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LCANEFNB_2	36863	37909	clbA	ARO:3002814	clbA	92.77	99.71	CP006845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LCANEFNB_2	36863	37906	cfr(B)	Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin	88.90	99.33	KR610408
LCANEFNB_29	362104	363480	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	87.07	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LCANEFNB_2	36863	37906	clbA	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA	BLASTX	92.24	99.71	WP_012116915.1
LCANEFNB_29	362104	363474	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	86.43	99.78	WP_003242953.1
LCANEFNB_2	34594	35112	satA	streptothricin N-acetyltransferase SatA	BLASTX	82.66	100.00	WP_003242546.1
LCANEFNB_11	5340	7937	rphC	rifamycin-inactivating phosphotransferase RphC	INTERNAL_STOP	80.94	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LCANEFNB_22	377369	378550	capB	0.0	Capsule	Immune modulation	81.79	99.66	NP_391471
LCANEFNB_22	378565	379014	capC	3.53e-114	Capsule	Immune modulation	83.59	99.78	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LCANEFNB_3	31771	32907	tufA	0.0	elongation factor Tu	86.54	95.69	AHM69299
LCANEFNB_6	4401	5270	pdxS	6.45e-153	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	84.83	98.31	ACE61268
LCANEFNB_11	212052	211276	CodY	2.82e-124	nutrient-responsive regulator	80.69	100.00	ACJ80679
LCANEFNB_11	652327	651935	spxA1	1.28e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
LCANEFNB_2	20377	20574	CspA	1.31e-32	cold shock protein	92.42	100.00	CAA62903
LCANEFNB_28	104939	105133	CspD	1.13e-27	cold shock protein	80.00	98.48	CAC99957
LCANEFNB_28	104939	105136	CspB	2.34e-27	cold shock protein	80.30	100.00	CAD00094
LCANEFNB_2	20377	20571	CspR	6.50e-27	cold shock protein	80.00	98.48	AAO82613
LCANEFNB_22	293298	294266	atpA	0.0	ATP synthase subunit alpha	81.11	64.34	ABD31377