Genome ID:GCA_002269195.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 4 | 16.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFHJNDMF_1 | 3729816 | 3730133 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| KFHJNDMF_1 | 3729478 | 3729816 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| KFHJNDMF_1 | 3219254 | 3221824 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| KFHJNDMF_1 | 2878056 | 2879699 | vmlR | ARO:3004476 | vmlR | 98.32 | 100.00 | NC_000964.3 |
| KFHJNDMF_1 | 2633452 | 2634045 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| KFHJNDMF_1 | 2567943 | 2569376 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| KFHJNDMF_1 | 2553553 | 2554473 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| KFHJNDMF_1 | 681485 | 682336 | aadK | ARO:3002627 | aadK | 98.24 | 99.65 | AL009126.1 |
| KFHJNDMF_1 | 663101 | 664303 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| KFHJNDMF_1 | 478853 | 480022 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KFHJNDMF_1 | 681485 | 682336 | aadK | Streptomycin | 98.48 | 99.65 | M26879 |
| KFHJNDMF_1 | 2553553 | 2554473 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFHJNDMF_1 | 2553553 | 2554461 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| KFHJNDMF_1 | 681488 | 682336 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| KFHJNDMF_1 | 2878059 | 2879699 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 96.71 | 99.82 | WP_003234144.1 |
| KFHJNDMF_1 | 2231138 | 2231530 | satA | streptothricin N-acetyltransferase SatA | PARTIALX | 91.60 | 75.72 | WP_003242546.1 |
| KFHJNDMF_1 | 141748 | 144345 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KFHJNDMF_1 | 1740615 | 1741796 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| KFHJNDMF_1 | 1243089 | 1243874 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| KFHJNDMF_1 | 1738990 | 1740132 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| KFHJNDMF_1 | 88898 | 90661 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| KFHJNDMF_1 | 1239264 | 1240202 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 100.00 | NP_391077 |
| KFHJNDMF_1 | 263961 | 264602 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| KFHJNDMF_1 | 1740151 | 1740600 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| KFHJNDMF_1 | 1241867 | 1243063 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.75 | 100.00 | NP_391079 |
| KFHJNDMF_1 | 1232108 | 1239244 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.57 | 100.00 | NP_391076 |
| KFHJNDMF_1 | 1240230 | 1241849 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.28 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KFHJNDMF_1 | 2394605 | 2395741 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| KFHJNDMF_1 | 2279127 | 2279996 | pdxS | 3.12e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KFHJNDMF_1 | 4047873 | 4048649 | CodY | 3.40e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KFHJNDMF_1 | 1588757 | 1589326 | ClpP | 2.52e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |