Genome ID:GCA_002271425.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 9 | 9 | 16.82 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFGMGPOA_12 | 423322 | 423660 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| IFGMGPOA_12 | 423005 | 423322 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| IFGMGPOA_17 | 351400 | 352569 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| IFGMGPOA_33 | 252396 | 254966 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| IFGMGPOA_36 | 109567 | 110487 | mphK | ARO:3004541 | mphK | 99.02 | 100.00 | CP010314.1 |
| IFGMGPOA_36 | 96235 | 97674 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.42 | JYFL01000006.1 |
| IFGMGPOA_36 | 46586 | 47179 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| IFGMGPOA_43 | 33377 | 34240 | aadK | ARO:3002627 | aadK | 97.89 | 101.06 | AL009126.1 |
| IFGMGPOA_34 | 28879 | 30525 | vmlR | ARO:3004476 | vmlR | 99.45 | 100.18 | NC_000964.3 |
| IFGMGPOA_43 | 14800 | 16002 | blt | ARO:3003006 | blt | 98.75 | 100.00 | L32599.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IFGMGPOA_36 | 109567 | 110487 | mph(K) | Spiramycin, Telithromycin | 99.35 | 100.00 | NC_000964 |
| IFGMGPOA_43 | 33388 | 34240 | aadK | Streptomycin | 98.12 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFGMGPOA_34 | 28879 | 30522 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.45 | 100.00 | WP_003234144.1 |
| IFGMGPOA_36 | 109570 | 110487 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.02 | 100.00 | WP_003246254.1 |
| IFGMGPOA_43 | 33389 | 34240 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.89 | 100.00 | WP_003229862.1 |
| IFGMGPOA_17 | 60891 | 63488 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.06 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IFGMGPOA_5 | 156910 | 158091 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| IFGMGPOA_17 | 154082 | 154723 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.53 | 100.00 | NP_390062 |
| IFGMGPOA_7 | 103254 | 104039 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| IFGMGPOA_7 | 104065 | 105261 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| IFGMGPOA_17 | 6497 | 8260 | dep/capD | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_389723 |
| IFGMGPOA_5 | 158574 | 159716 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| IFGMGPOA_7 | 106937 | 107875 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.72 | 100.00 | NP_391077 |
| IFGMGPOA_5 | 158106 | 158555 | capC | 0.0 | Capsule | Immune modulation | 98.00 | 100.00 | NP_391470 |
| IFGMGPOA_7 | 105290 | 106909 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.35 | 100.00 | NP_391078 |
| IFGMGPOA_8 | 1 | 4731 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.29 | 66.29 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IFGMGPOA_42 | 31672 | 32808 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| IFGMGPOA_45 | 4265 | 5134 | pdxS | 1.10e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| IFGMGPOA_12 | 111781 | 111005 | CodY | 3.77e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| IFGMGPOA_5 | 312325 | 311756 | ClpP | 2.38e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| IFGMGPOA_14 | 92413 | 92021 | spxA1 | 1.29e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| IFGMGPOA_14 | 92413 | 92021 | spx | 7.72e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| IFGMGPOA_44 | 20513 | 20755 | SpoVG | 7.48e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| IFGMGPOA_34 | 77628 | 77431 | CspA | 4.61e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| IFGMGPOA_17 | 165954 | 166148 | CspD | 1.31e-27 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| IFGMGPOA_15 | 134070 | 134264 | CspB | 1.51e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |