Genome ID:GCA_002272405.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
119816.31

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NOCPLFFO_12353141354310bmrARO:3003007bmr99.74100.00M33768.1
NOCPLFFO_21109567110487mphKARO:3004541mphK99.02100.00CP010314.1
NOCPLFFO_219623597674lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
NOCPLFFO_214658647179tmrBARO:3003059tmrB98.48100.00AL009126.3
NOCPLFFO_94157141888ykkDARO:3003064ykkD99.05100.00AL009126.1
NOCPLFFO_94123341571ykkCARO:3003063ykkC100.00100.00AL009126.1
NOCPLFFO_243334334206aadKARO:3002627aadK97.89101.06AL009126.1
NOCPLFFO_192888130527vmlRARO:3004476vmlR99.45100.18NC_000964.3
NOCPLFFO_172719829768Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
NOCPLFFO_241476615968bltARO:3003006blt98.75100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NOCPLFFO_21109567110487mph(K)Spiramycin, Telithromycin99.35100.00NC_000964
NOCPLFFO_243335434206aadKStreptomycin98.1299.77M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NOCPLFFO_192888130524vmlRABC-F type ribosomal protection protein VmlRBLASTX99.45100.00WP_003234144.1
NOCPLFFO_21109570110487mphKmacrolide 2'-phosphotransferase MphKBLASTX99.02100.00WP_003246254.1
NOCPLFFO_243335534206aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
NOCPLFFO_126263265229rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.06100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NOCPLFFO_4155024156205capB0.0CapsuleImmune modulation99.66100.00NP_391471
NOCPLFFO_12155823156464hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
NOCPLFFO_5389577390362dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
NOCPLFFO_5390388391584dhbC0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391079
NOCPLFFO_12825710020dep/capD0.0CapsuleImmune modulation99.21100.00NP_389723
NOCPLFFO_4156688157830capA0.0CapsuleImmune modulation98.95100.00NP_391469
NOCPLFFO_5393260394198dhbB0.0BacillibactinNutritional/Metabolic factor98.72100.00NP_391077
NOCPLFFO_4156220156669capC0.0CapsuleImmune modulation98.00100.00NP_391470
NOCPLFFO_5391613393232dhbE0.0BacillibactinNutritional/Metabolic factor97.35100.00NP_391078
NOCPLFFO_614721dhbF0.0BacillibactinNutritional/Metabolic factor98.3166.15NP_391076

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NOCPLFFO_233164032776tufA0.0elongation factor Tu84.9695.69AHM69299
NOCPLFFO_281112210253pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
NOCPLFFO_9353112353888CodY3.85e-125nutrient-responsive regulator81.08100.00ACJ80679
NOCPLFFO_5126950126381ClpP2.38e-99part of proteolytic complex81.0597.44BAB94595
NOCPLFFO_8275316275708spxA12.44e-70redox-responsive transcription factor83.97100.00AAF21893
NOCPLFFO_8275316275708spx1.46e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
NOCPLFFO_252047720719SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
NOCPLFFO_197763077433CspA4.61e-32cold shock protein90.91100.00CAA62903
NOCPLFFO_12167695167889CspD1.32e-27cold shock protein80.0098.48CAC99957
NOCPLFFO_12167695167892CspB2.73e-27cold shock protein80.30100.00CAD00094