Genome ID:GCA_002286255.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 23 | 27 | 35.47 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MDDNCMGL_1 | 1147982 | 1148851 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| MDDNCMGL_1 | 1147389 | 1147982 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| MDDNCMGL_1 | 1371851 | 1372828 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681444 |
| MDDNCMGL_1 | 1372825 | 1374084 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681445 |
| MDDNCMGL_1 | 1147389 | 1147982 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| MDDNCMGL_1 | 1147389 | 1147982 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| MDDNCMGL_1 | 904486 | 906144 | fbp54 | 0.0 | FBPs | Adherence | 99.64 | 100.00 | WP_011227179 |
| MDDNCMGL_1 | 1369032 | 1369802 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 99.61 | 99.23 | WP_011681440 |
| MDDNCMGL_1 | 43729 | 44568 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| MDDNCMGL_1 | 1370865 | 1371833 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 99.48 | 100.00 | WP_011681443 |
| MDDNCMGL_1 | 1370148 | 1370863 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 99.30 | 99.86 | WP_011681442 |
| MDDNCMGL_1 | 1022055 | 1022786 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.91 | 100.00 | WP_011681176 |
| MDDNCMGL_1 | 1022055 | 1022786 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011226048 |
| MDDNCMGL_1 | 1182753 | 1183514 | srtA | 0.0 | Sortase A | Exoenzyme | 98.56 | 100.00 | - |
| MDDNCMGL_1 | 1022055 | 1022786 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011227248 |
| MDDNCMGL_1 | 1010628 | 1012043 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.38 | 100.00 | WP_011681165 |
| MDDNCMGL_1 | 1089835 | 1090628 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.36 | 100.25 | - |
| MDDNCMGL_1 | 1020604 | 1021344 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 98.25 | 100.00 | WP_011226046 |
| MDDNCMGL_1 | 1021354 | 1022046 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 97.98 | 100.00 | WP_011227247 |
| MDDNCMGL_1 | 1021354 | 1022046 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 97.98 | 100.00 | WP_011226047 |
| MDDNCMGL_1 | 1022787 | 1024247 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.88 | 100.00 | WP_011681177 |
| MDDNCMGL_1 | 1020604 | 1021344 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.84 | 100.00 | WP_011681174 |
| MDDNCMGL_1 | 1020609 | 1021344 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.28 | 98.13 | WP_011227246 |
| MDDNCMGL_1 | 1019180 | 1020547 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 97.00 | 100.00 | WP_011226045 |
| MDDNCMGL_1 | 1022787 | 1024247 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 96.99 | 100.21 | WP_011226049 |
| MDDNCMGL_1 | 1374203 | 1375054 | rfbD | 0.0 | Capsule | Immune modulation | 96.83 | 100.00 | WP_014621820 |
| MDDNCMGL_1 | 1022787 | 1024247 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.03 | 100.21 | WP_041827043 |
| MDDNCMGL_1 | 1019182 | 1020547 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.58 | 99.85 | WP_011681173 |
| MDDNCMGL_1 | 1021354 | 1022046 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 90.19 | 100.00 | WP_011681175 |
| MDDNCMGL_1 | 622237 | 623540 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.17 | 99.54 | WP_000022832 |
| MDDNCMGL_1 | 1651037 | 1652047 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.66 | 99.90 | WP_002986042 |
| MDDNCMGL_1 | 158612 | 159895 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| MDDNCMGL_1 | 1145914 | 1146960 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| MDDNCMGL_1 | 1008260 | 1008846 | SPD_RS01775 | 1.11e-141 | Capsule | Immune modulation | 82.48 | 96.70 | WP_001819836 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDDNCMGL_1 | 1186201 | 1187184 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| MDDNCMGL_1 | 732212 | 733285 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| MDDNCMGL_1 | 1541001 | 1543304 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 93.10 | 99.22 | AAK74619 |
| MDDNCMGL_1 | 535133 | 536101 | spr0084 | 0.0 | pathogenitcity related | 92.88 | 98.48 | AAK98888 |
| MDDNCMGL_1 | 1262920 | 1264401 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| MDDNCMGL_1 | 765812 | 768058 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| MDDNCMGL_1 | 63360 | 64358 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| MDDNCMGL_1 | 27245 | 28216 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| MDDNCMGL_1 | 1424171 | 1423020 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| MDDNCMGL_1 | 1388089 | 1386101 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| MDDNCMGL_1 | 1170002 | 1168272 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.22 | 100.00 | AAK34199 |
| MDDNCMGL_1 | 1854078 | 1852600 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| MDDNCMGL_1 | 622237 | 623538 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| MDDNCMGL_1 | 1837892 | 1836000 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.74 | 98.90 | ABP91129 |
| MDDNCMGL_1 | 770983 | 769274 | PGM | 0.0 | phosphoglucomutase | 84.06 | 99.65 | ACH87041 |
| MDDNCMGL_1 | 1694019 | 1695029 | pdh | 0.0 | pyruvate dehydrogenase | 82.79 | 99.70 | ABP91006 |
| MDDNCMGL_1 | 941342 | 939981 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| MDDNCMGL_1 | 607798 | 608688 | bglB | 1.34e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| MDDNCMGL_1 | 850693 | 849755 | SP_0676 | 2.37e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| MDDNCMGL_1 | 768250 | 769107 | metF | 4.50e-164 | methionine biosynthesis enzymes | 86.01 | 99.31 | AAK74739 |
| MDDNCMGL_1 | 1062493 | 1061789 | covR | 2.66e-130 | responder protein | 85.11 | 100.00 | AAK71319 |
| MDDNCMGL_1 | 1238315 | 1237644 | rr01 | 3.02e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| MDDNCMGL_1 | 1062493 | 1061789 | walR | 1.59e-120 | DNA-binding response regulator | 81.28 | 100.00 | ANC99504 |
| MDDNCMGL_1 | 314437 | 315123 | CovR | 3.11e-118 | serves to repress GAS virulence factor-encoding genes | 81.22 | 100.00 | ACE75886 |
| MDDNCMGL_1 | 774938 | 775606 | CiaR | 2.03e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| MDDNCMGL_1 | 774938 | 775609 | ciaR | 2.00e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| MDDNCMGL_1 | 64634 | 65008 | SpxA2 | 1.16e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| MDDNCMGL_1 | 160053 | 160553 | RopE (M5005_Spy_1611) | 4.95e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| MDDNCMGL_1 | 1541001 | 1543298 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 83.07 | 98.08 | MYN69560 |
| MDDNCMGL_1 | 1729880 | 1728861 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |