Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 2 | 8.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFBNAGCM_233 | 5670 | 6452 | ANT(9)-Ia | ARO:3002630 | ANT(9)-Ia | 100.00 | 100.00 | X02588.1 |
| DFBNAGCM_182 | 4405 | 5814 | fexB | ARO:3007019 | fexB | 99.57 | 100.00 | JN201336.1 |
| DFBNAGCM_234 | 3873 | 5792 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.00 | AB039845.1 |
| DFBNAGCM_14 | 3454 | 4158 | ErmA | ARO:3000347 | ErmA | 85.11 | 96.71 | X03216.1 |
| DFBNAGCM_234 | 2303 | 3679 | tet(L) | ARO:3000179 | tet(L) | 98.69 | 100.00 | M11036.1 |
| DFBNAGCM_29 | 2246 | 2740 | lnuC | ARO:3002837 | lnuC | 98.17 | 100.00 | AY928180.1 |
| DFBNAGCM_95 | 141 | 908 | ANT(6)-Ia | ARO:3002626 | ANT(6)-Ia | 100.00 | 88.85 | KF648874.1 |
| DFBNAGCM_143 | 1 | 711 | ErmA | ARO:3000347 | ErmA | 99.58 | 97.53 | X03216.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DFBNAGCM_14 | 3454 | 4159 | erm(A) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 96.45 | EU348758 |
| DFBNAGCM_95 | 141 | 909 | ant(6)-Ia | Streptomycin | 100.00 | 89.00 | KF421157 |
| DFBNAGCM_233 | 5670 | 6452 | ant(9)-Ia | Spectinomycin | 99.87 | 100.00 | X02588 |
| DFBNAGCM_182 | 4405 | 5814 | fexB | Chloramphenicol, Florfenicol | 99.86 | 100.00 | JN201336 |
| DFBNAGCM_234 | 2303 | 3679 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.71 | 100.00 | AY081910 |
| DFBNAGCM_234 | 3873 | 5792 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.06 | 100.00 | AM990992 |
| DFBNAGCM_29 | 2246 | 2740 | lnu(C) | Lincomycin | 98.79 | 100.00 | AY928180 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFBNAGCM_233 | 5670 | 6449 | ant(9)-Ia | aminoglycoside nucleotidyltransferase ANT(9)-Ia | EXACTX | 100.00 | 100.00 | WP_000067268.1 |
| DFBNAGCM_95 | 144 | 908 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | PARTIAL_CONTIG_ENDX | 100.00 | 88.85 | WP_002294505.1 |
| DFBNAGCM_143 | 1 | 711 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 99.58 | 97.53 | WP_001072201.1 |
| DFBNAGCM_182 | 4405 | 5811 | fexB | chloramphenicol/florfenicol efflux MFS transporter FexB | BLASTX | 99.57 | 100.00 | WP_002415211.1 |
| DFBNAGCM_234 | 3876 | 5792 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.37 | 100.00 | WP_000691727.1 |
| DFBNAGCM_234 | 2306 | 3679 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_002294500.1 |
| DFBNAGCM_29 | 2246 | 2737 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
| DFBNAGCM_14 | 3454 | 4158 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 85.11 | 96.71 | WP_001072197.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DFBNAGCM_191 | 24578 | 25285 | WalR | 2.46e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| DFBNAGCM_181 | 3502 | 3699 | CspR | 2.61e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| DFBNAGCM_181 | 3502 | 3696 | CspA | 1.27e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |