Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 2 | 4.47 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFIDPNOP_12 | 68372 | 68866 | lnuC | ARO:3002837 | lnuC | 98.16 | 100.00 | AY928180.1 |
| MFIDPNOP_38 | 11889 | 13265 | tet(L) | ARO:3000179 | tet(L) | 98.69 | 100.00 | M11036.1 |
| MFIDPNOP_38 | 9776 | 11695 | tet(M) | ARO:3000186 | tet(M) | 98.75 | 100.00 | AB039845.1 |
| MFIDPNOP_63 | 3499 | 4212 | ErmA | ARO:3000347 | ErmA | 84.75 | 97.53 | X03216.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MFIDPNOP_38 | 11889 | 13265 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.71 | 100.00 | AY081910 |
| MFIDPNOP_63 | 3508 | 4213 | erm(A) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.58 | 96.45 | EU348758 |
| MFIDPNOP_38 | 9776 | 11695 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.06 | 100.00 | AM990992 |
| MFIDPNOP_12 | 68372 | 68866 | lnu(C) | Lincomycin | 98.99 | 100.00 | AY928180 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFIDPNOP_38 | 9776 | 11692 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.37 | 100.00 | WP_000691727.1 |
| MFIDPNOP_38 | 11889 | 13262 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_002294500.1 |
| MFIDPNOP_12 | 68378 | 68866 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.16 | 99.39 | WP_063851341.1 |
| MFIDPNOP_63 | 3505 | 4212 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 84.75 | 97.12 | WP_001072197.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MFIDPNOP_100 | 33751 | 34458 | WalR | 1.91e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| MFIDPNOP_6 | 20597 | 20794 | CspR | 6.26e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| MFIDPNOP_6 | 20597 | 20791 | CspA | 3.05e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |