Genome ID:GCA_002289925.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
6026.32

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HIAAEOGC_63790639282tet(L)ARO:3000179tet(L)98.69100.00M11036.1
HIAAEOGC_63579337712tet(M)ARO:3000186tet(M)98.75100.00AB039845.1
HIAAEOGC_133478635280lnuCARO:3002837lnuC98.17100.00AY928180.1
HIAAEOGC_3864527315ANT(6)-IaARO:3002626ANT(6)-Ia100.00100.00KF648874.1
HIAAEOGC_6143195179TEM-171ARO:3001037TEM-171100.00100.00GQ149347.1
HIAAEOGC_699511685ErmAARO:3000347ErmA85.19100.41X03216.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HIAAEOGC_3864527315ant(6)-IaStreptomycin100.00100.00KF421157
HIAAEOGC_6143195179blaTEM-171Unknown Beta-lactam100.00100.00GQ149347
HIAAEOGC_63790639282tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.71100.00AY081910
HIAAEOGC_699511676erm(A)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.5999.18EU348758
HIAAEOGC_63579337712tet(M)Doxycycline, Tetracycline, Minocycline99.06100.00AM990992
HIAAEOGC_133478635280lnu(C)Lincomycin98.79100.00AY928180

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HIAAEOGC_3864527312ant(6)-Iaaminoglycoside nucleotidyltransferase ANT(6)-IaEXACTX100.00100.00WP_002294505.1
HIAAEOGC_6143225179blaTEM-171class A beta-lactamase TEM-171ALLELEX100.00100.00WP_015058867.1
HIAAEOGC_63579337709tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.37100.00WP_000691727.1
HIAAEOGC_63790639279tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_002294500.1
HIAAEOGC_133478635277lnu(C)lincosamide nucleotidyltransferase Lnu(C)BLASTX98.17100.00WP_063851341.1
HIAAEOGC_699511679erm(A)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)BLASTX85.19100.00WP_001072197.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HIAAEOGC_13755938266WalR1.98e-116transcriptional regulatory protein85.59100.43EPH95667
HIAAEOGC_663839938596CspR9.72e-29cold shock protein81.82100.00AAO82613
HIAAEOGC_663839938593CspA4.74e-28cold shock protein81.5498.48CAA62903