Genome ID：GCA_002443035.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	26	29	38.95

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
FLINNDBO_1	668043	668894	rfbD	0.0	Capsule	Immune modulation	100.00	100.00	WP_014621820
FLINNDBO_1	455809	456402	STR_RS05880	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
FLINNDBO_1	661653	662462	STU_RS16245	0.0	Capsule	Immune modulation	100.00	100.00	WP_002948020
FLINNDBO_1	657592	659376	STU_RS16230	0.0	Capsule	Immune modulation	99.89	100.00	WP_011226325
FLINNDBO_1	1192819	1193658	cbpD	0.0	Autolysin	Exoenzyme	99.88	100.00	WP_011226733
FLINNDBO_1	455809	456402	STER_RS06030	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
FLINNDBO_1	455809	456402	STU_RS15260	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
FLINNDBO_1	662446	663402	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
FLINNDBO_1	659373	660428	STU_RS16235	0.0	Capsule	Immune modulation	99.62	100.00	WP_002948022
FLINNDBO_1	664656	665666	STU_RS16260	0.0	Capsule	Immune modulation	99.60	100.00	WP_011226330
FLINNDBO_1	190057	191715	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
FLINNDBO_1	660448	661653	STU_RS16240	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226326
FLINNDBO_1	663399	664547	STU_RS16255	0.0	Capsule	Immune modulation	99.48	100.00	WP_041828290
FLINNDBO_1	491167	491928	srtA	0.0	Sortase A	Exoenzyme	99.34	100.00	-
FLINNDBO_1	456402	457271	rfbA	0.0	Capsule	Immune modulation	99.31	100.00	WP_011681286
FLINNDBO_1	344277	345008	STU_RS14645	0.0	Capsule	Immune modulation	98.77	100.00	WP_011226048
FLINNDBO_1	344277	345008	STER_RS05315	0.0	Capsule	Immune modulation	98.63	100.00	WP_011681176
FLINNDBO_1	344277	345008	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
FLINNDBO_1	410977	411766	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.48	99.87	-
FLINNDBO_1	342826	343566	STER_RS05305	0.0	Capsule	Immune modulation	97.98	100.00	WP_011681174
FLINNDBO_1	345009	346469	STER_RS05320	0.0	Capsule	Immune modulation	97.60	100.00	WP_011681177
FLINNDBO_1	665669	666940	STU_RS16265	0.0	Capsule	Immune modulation	97.48	99.76	WP_011226331
FLINNDBO_1	342826	343566	STU_RS14635	0.0	Capsule	Immune modulation	97.30	100.00	WP_011226046
FLINNDBO_1	342831	343566	STR_RS05250	0.0	Capsule	Immune modulation	97.01	98.13	WP_011227246
FLINNDBO_1	345009	346469	STU_RS14650	0.0	Capsule	Immune modulation	96.58	100.21	WP_011226049
FLINNDBO_1	1777222	1782117	SAG_RS09105	0.0	Agglutinin receptor	Adherence	96.06	99.98	WP_000167699
FLINNDBO_1	345009	346469	STR_RS05265	0.0	Capsule	Immune modulation	95.96	100.21	WP_041827043
FLINNDBO_1	1777174	1782117	SSU98_0978	0.0	Agglutinin receptor	Adherence	95.80	99.78	YP_001200536
FLINNDBO_1	1777174	1782117	SSU05_0965	0.0	Agglutinin receptor	Adherence	95.77	99.78	YP_001198331
FLINNDBO_1	341403	342768	STER_RS05300	0.0	Capsule	Immune modulation	95.24	99.85	WP_011681173
FLINNDBO_1	341401	342768	STU_RS14630	0.0	Capsule	Immune modulation	95.17	100.00	WP_011226045
FLINNDBO_1	343576	344268	STER_RS05310	0.0	Capsule	Immune modulation	90.19	100.00	WP_011681175
FLINNDBO_1	343576	344268	STR_RS05255	0.0	Capsule	Immune modulation	89.61	100.00	WP_011227247
FLINNDBO_1	343576	344268	STU_RS14640	0.0	Capsule	Immune modulation	89.61	100.00	WP_011226047
FLINNDBO_1	1742471	1743774	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
FLINNDBO_1	948756	949766	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.82	99.51	WP_002986042
FLINNDBO_1	454334	455380	rfbB	0.0	Capsule	Immune modulation	83.21	99.90	WP_002263087
FLINNDBO_1	1295610	1296893	tig/ropA	0.0	Trigger factor	Stress survival	80.58	99.77	WP_000107753
FLINNDBO_1	331730	332313	SPD_RS01775	5.00e-145	Capsule	Immune modulation	82.91	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
FLINNDBO_1	1777201	1782114	B9H01_RS04765	0.0	glucan-binding protein	97.07	99.70	AUS90958
FLINNDBO_1	494615	495598	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
FLINNDBO_1	58707	59780	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
FLINNDBO_1	1660185	1661153	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
FLINNDBO_1	827127	829430	pfl2(Sp_0459)	0.0	formate acetyltransferase	93.10	99.22	AAK74619
FLINNDBO_1	572846	574327	SPD_0310	0.0	UPF0371 protein SPD_0310	92.11	100.00	ABJ54480
FLINNDBO_1	79230	81476	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
FLINNDBO_1	1213680	1214678	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
FLINNDBO_1	1176337	1177308	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
FLINNDBO_1	711895	710744	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
FLINNDBO_1	683897	681909	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
FLINNDBO_1	478420	476690	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.69	100.00	AAK34199
FLINNDBO_1	1138112	1136634	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
FLINNDBO_1	1742471	1743772	Eno	0.0	enolase	86.21	99.77	ABP90468
FLINNDBO_1	1122916	1121024	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
FLINNDBO_1	84401	82692	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
FLINNDBO_1	990709	991719	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
FLINNDBO_1	217755	216394	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
FLINNDBO_1	1042708	1040816	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
FLINNDBO_1	1728040	1728930	bglB	1.31e-178	putative phospho--glucosidase	88.89	99.66	AAK33487
FLINNDBO_1	81668	82525	metF	8.50e-165	methionine biosynthesis enzymes	86.36	99.31	AAK74739
FLINNDBO_1	132523	131834	SP_0676	2.17e-141	transcription facot	82.17	71.43	AAK74821
FLINNDBO_1	383297	382593	covR	6.65e-131	responder protein	85.53	100.00	AAK71319
FLINNDBO_1	540738	540067	rr01	1.18e-125	response regulator	84.38	99.56	CAB54566
FLINNDBO_1	383297	382593	walR	3.15e-121	DNA-binding response regulator	81.70	100.00	ANC99504
FLINNDBO_1	88355	89023	CiaR	2.34e-119	two-component response regulator	85.20	99.55	AAK74935
FLINNDBO_1	1444504	1445190	CovR	9.89e-118	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
FLINNDBO_1	88355	89026	ciaR	2.69e-117	two component system response regulator	83.04	99.12	AIK75708
FLINNDBO_1	1214954	1215328	SpxA2	1.13e-69	transcriptional regulator	91.20	94.70	ERL21461
FLINNDBO_1	1297051	1297551	RopE (M5005_Spy_1611)	4.84e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
FLINNDBO_1	827127	829424	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.07	98.08	MYN69560
FLINNDBO_1	1028252	1027233	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451