Genome ID:GCA_002810985.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4104.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LCEDCJLN_3157603159577tet(Q)ARO:3000191tet(Q)100.0097.56Z21523.1
LCEDCJLN_188940490306CepA-44ARO:3006225CepA-44100.00100.00NG_050386.1
LCEDCJLN_1848116016Mef(En2)ARO:3004659Mef(En2)99.25100.00AF251288.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LCEDCJLN_188940490306cepA-44Unknown Beta-lactam100.00100.00U05885
LCEDCJLN_3157603159528tet(Q)Doxycycline, Tetracycline, Minocycline100.00100.00Z21523

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LCEDCJLN_188940490303cepA-44extended-spectrum class A beta-lactamase CepA-44ALLELEX100.00100.00WP_032579291.1
LCEDCJLN_1842774786lnu(AN2)lincosamide nucleotidyltransferase Lnu(AN2)EXACTX100.00100.00WP_004308783.1
LCEDCJLN_3157606159528tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)EXACTX100.00100.00WP_002560998.1
LCEDCJLN_1848146016mef(En2)macrolide efflux MFS transporter Mef(En2)BLASTX99.25100.00WP_063853729.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LCEDCJLN_75956960762bft-20.0BFT B. fragilis toxin, subtype 2Exotoxin100.00100.00BAA77277
LCEDCJLN_75956960762bft-30.0BFT B. fragilis toxin, subtype 3Exotoxin96.90100.00BAA77275
LCEDCJLN_75956960762bft-10.0BFT B. fragilis toxin, subtype 1Exotoxin94.89100.00BAA77276

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found