Genome ID：GCA_002843115.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	29	38.29

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HKCAJAIO_1	1126221	1126814	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
HKCAJAIO_1	999904	1001364	STER_RS05320	0.0	Capsule	Immune modulation	99.93	100.00	WP_011681177
HKCAJAIO_1	1126221	1126814	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
HKCAJAIO_1	1338868	1339677	STU_RS16245	0.0	Capsule	Immune modulation	99.75	100.00	WP_002948020
HKCAJAIO_1	1126814	1127683	rfbA	0.0	Capsule	Immune modulation	99.66	100.00	WP_011681286
HKCAJAIO_1	1126221	1126814	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
HKCAJAIO_1	881262	882920	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
HKCAJAIO_1	1339661	1340617	STU_RS16250	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226328
HKCAJAIO_1	43524	44363	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
HKCAJAIO_1	1334795	1336579	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
HKCAJAIO_1	1337663	1338868	STU_RS16240	0.0	Capsule	Immune modulation	99.17	100.00	WP_011226326
HKCAJAIO_1	1346804	1347655	rfbD	0.0	Capsule	Immune modulation	99.06	100.00	WP_014621820
HKCAJAIO_1	999172	999903	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
HKCAJAIO_1	1163007	1163768	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
HKCAJAIO_1	1340614	1341762	STU_RS16255	0.0	Capsule	Immune modulation	98.78	100.00	WP_041828290
HKCAJAIO_1	999172	999903	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
HKCAJAIO_1	999172	999903	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
HKCAJAIO_1	1067246	1068039	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.24	100.25	-
HKCAJAIO_1	987740	989155	STER_RS05250	0.0	Capsule	Immune modulation	98.23	100.00	WP_011681165
HKCAJAIO_1	997721	998461	STU_RS14635	0.0	Capsule	Immune modulation	98.11	100.00	WP_011226046
HKCAJAIO_1	997721	998461	STER_RS05305	0.0	Capsule	Immune modulation	97.71	100.00	WP_011681174
HKCAJAIO_1	999904	1001364	STU_RS14650	0.0	Capsule	Immune modulation	97.40	100.21	WP_011226049
HKCAJAIO_1	997726	998461	STR_RS05250	0.0	Capsule	Immune modulation	97.15	98.13	WP_011227246
HKCAJAIO_1	996297	997664	STU_RS14630	0.0	Capsule	Immune modulation	97.00	100.00	WP_011226045
HKCAJAIO_1	999904	1001364	STR_RS05265	0.0	Capsule	Immune modulation	96.85	100.21	WP_041827043
HKCAJAIO_1	998471	999163	STR_RS05255	0.0	Capsule	Immune modulation	95.38	100.00	WP_011227247
HKCAJAIO_1	998471	999163	STU_RS14640	0.0	Capsule	Immune modulation	95.38	100.00	WP_011226047
HKCAJAIO_1	1336576	1337643	STU_RS16235	0.0	Capsule	Immune modulation	95.27	101.14	WP_002948022
HKCAJAIO_1	996299	997664	STER_RS05300	0.0	Capsule	Immune modulation	94.58	99.85	WP_011681173
HKCAJAIO_1	998471	999163	STER_RS05310	0.0	Capsule	Immune modulation	90.48	100.00	WP_011681175
HKCAJAIO_1	1344427	1345701	STU_RS16265	0.0	Capsule	Immune modulation	89.42	99.92	WP_011226331
HKCAJAIO_1	600558	601861	eno	0.0	Streptococcal enolase	Exoenzyme	88.02	99.46	WP_000022832
HKCAJAIO_1	1633194	1634204	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
HKCAJAIO_1	139751	141034	tig/ropA	0.0	Trigger factor	Stress survival	80.81	99.77	WP_000107753
HKCAJAIO_1	1124746	1125792	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
HKCAJAIO_1	985337	985920	SPD_RS01775	1.08e-151	Capsule	Immune modulation	83.59	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HKCAJAIO_1	1166455	1167438	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
HKCAJAIO_1	719830	720903	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
HKCAJAIO_1	1510212	1512515	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
HKCAJAIO_1	516920	517888	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
HKCAJAIO_1	748150	750396	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
HKCAJAIO_1	1236767	1238248	SPD_0310	0.0	UPF0371 protein SPD_0310	91.70	100.00	ABJ54480
HKCAJAIO_1	63155	64153	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
HKCAJAIO_1	27041	28012	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
HKCAJAIO_1	1396195	1395044	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.06	99.74	AAL00050
HKCAJAIO_1	1360832	1358844	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
HKCAJAIO_1	1150256	1148526	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
HKCAJAIO_1	1840194	1838716	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
HKCAJAIO_1	600558	601859	Eno	0.0	enolase	86.21	99.77	ABP90468
HKCAJAIO_1	1825005	1823113	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
HKCAJAIO_1	753321	751612	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
HKCAJAIO_1	1676556	1677566	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
HKCAJAIO_1	904774	903413	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
HKCAJAIO_1	1726900	1725008	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
HKCAJAIO_1	586122	587012	bglB	5.25e-178	putative phospho--glucosidase	88.55	99.66	AAK33487
HKCAJAIO_1	826165	825227	SP_0676	2.35e-167	transcription facot	81.15	97.20	AAK74821
HKCAJAIO_1	750588	751445	metF	1.53e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
HKCAJAIO_1	1039566	1038862	covR	4.37e-131	responder protein	85.53	100.00	AAK71319
HKCAJAIO_1	1217792	1217121	rr01	3.00e-124	response regulator	83.93	99.56	CAB54566
HKCAJAIO_1	1039566	1038862	walR	1.84e-121	DNA-binding response regulator	82.13	100.00	ANC99504
HKCAJAIO_1	292779	293465	CovR	1.01e-117	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
HKCAJAIO_1	757275	757943	CiaR	2.02e-117	two-component response regulator	84.31	99.55	AAK74935
HKCAJAIO_1	757275	757946	ciaR	1.99e-115	two component system response regulator	82.14	99.12	AIK75708
HKCAJAIO_1	64429	64803	SpxA2	1.15e-69	transcriptional regulator	91.20	94.70	ERL21461
HKCAJAIO_1	916136	916537	SpxA1	3.76e-66	transcriptional regulator	80.60	100.00	ERL19273
HKCAJAIO_1	141192	141692	RopE (M5005_Spy_1611)	4.92e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
HKCAJAIO_1	1510212	1512509	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
HKCAJAIO_1	1712440	1711421	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451