Genome ID:GCA_002864145.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2288.49

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LKMAKOFG_534894865tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline86.86100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LKMAKOFG_534954865tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.0099.78WP_003242953.1
LKMAKOFG_550785596satAstreptothricin N-acetyltransferase SatABLASTX80.35100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LKMAKOFG_127694978130capB0.0CapsuleImmune modulation82.2999.66NP_391471
LKMAKOFG_127814578594capC1.93e-113CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LKMAKOFG_172796626830tufA0.0elongation factor Tu86.8195.69AHM69299
LKMAKOFG_281237811509pdxS1.34e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
LKMAKOFG_19509294316CodY5.68e-125nutrient-responsive regulator81.08100.00ACJ80679
LKMAKOFG_95035150743spxA12.85e-70redox-responsive transcription factor83.21100.00AAF21893
LKMAKOFG_4284515284712CspA2.04e-31cold shock protein90.91100.00CAA62903
LKMAKOFG_3410963410769CspD2.69e-28cold shock protein81.5498.48CAC99957
LKMAKOFG_6163847164041CspB4.18e-27cold shock protein84.6198.48CAD00094
LKMAKOFG_4284515284709CspR2.67e-26cold shock protein80.0098.48AAO82613
LKMAKOFG_2322231323103lipA (SAUSA300_0829)1.48e-162lipoic acid synthetase80.8295.41ABD22039