Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBJJHKKE_18 | 5888 | 7807 | tet(W) | ARO:3000194 | tet(W) | 92.63 | 100.00 | AJ222769.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBJJHKKE_18 | 5888 | 7792 | tet(O/W/O)-2 | Doxycycline, Tetracycline, Minocycline | 89.21 | 99.01 | AY196920 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBJJHKKE_18 | 5888 | 7801 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 94.67 | 99.84 | WP_003672618.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CBJJHKKE_2 | 44912 | 45106 | CspA | 1.61e-27 | cold shock protein | 81.54 | 98.48 | CAA62903 |