Genome ID:GCA_002906075.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 8 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AHBBDOLG_2 | 836089 | 836427 | ykkC | ARO:3003063 | ykkC | 97.32 | 100.00 | AL009126.1 |
| AHBBDOLG_2 | 835772 | 836089 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| AHBBDOLG_4 | 350215 | 351648 | lmrB | ARO:3002813 | lmrB | 100.00 | 100.00 | JYFL01000006.1 |
| AHBBDOLG_4 | 303254 | 303847 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| AHBBDOLG_6 | 221651 | 224221 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| AHBBDOLG_5 | 220387 | 221241 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| AHBBDOLG_5 | 201917 | 203119 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| AHBBDOLG_4 | 61411 | 63057 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AHBBDOLG_3 | 192460 | 193836 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.13 | 100.00 | D12567 |
| AHBBDOLG_5 | 220387 | 221241 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| AHBBDOLG_4 | 363541 | 364460 | mph(K) | Spiramycin, Telithromycin | 97.61 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AHBBDOLG_3 | 192460 | 193833 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_063856081.1 |
| AHBBDOLG_5 | 220390 | 221241 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| AHBBDOLG_4 | 61411 | 63054 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| AHBBDOLG_3 | 195839 | 196357 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AHBBDOLG_1 | 203314 | 204495 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| AHBBDOLG_1 | 204978 | 206120 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| AHBBDOLG_1 | 683274 | 684212 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.15 | 100.00 | NP_391077 |
| AHBBDOLG_1 | 204510 | 204959 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| AHBBDOLG_1 | 679591 | 680376 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.11 | 100.00 | NP_391080 |
| AHBBDOLG_2 | 301331 | 303094 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| AHBBDOLG_2 | 181746 | 182387 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| AHBBDOLG_1 | 680402 | 681598 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391079 |
| AHBBDOLG_1 | 684232 | 691368 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391076 |
| AHBBDOLG_1 | 681627 | 683246 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.04 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AHBBDOLG_3 | 33416 | 32280 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| AHBBDOLG_3 | 148690 | 147821 | pdxS | 3.59e-150 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| AHBBDOLG_2 | 525849 | 525073 | CodY | 7.46e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| AHBBDOLG_1 | 356023 | 355454 | ClpP | 6.70e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| AHBBDOLG_7 | 112463 | 112855 | spxA1 | 1.25e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| AHBBDOLG_7 | 112463 | 112855 | spx | 7.45e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| AHBBDOLG_3 | 110516 | 110274 | SpoVG | 6.59e-38 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| AHBBDOLG_4 | 107558 | 107361 | CspA | 1.72e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| AHBBDOLG_6 | 311275 | 311081 | CspB | 3.09e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |