Genome ID：GCA_002925865.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	21	33	39.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
BCDHDMIP_8	83036	83887	rfbD	0.0	Capsule	Immune modulation	94.37	100.00	WP_014621820
BCDHDMIP_15	88602	90062	STU_RS14650	0.0	Capsule	Immune modulation	93.84	100.14	WP_011226049
BCDHDMIP_15	88602	90062	STER_RS05320	0.0	Capsule	Immune modulation	93.78	99.93	WP_011681177
BCDHDMIP_8	80039	80848	STU_RS16245	0.0	Capsule	Immune modulation	93.71	99.88	WP_002948020
BCDHDMIP_15	92303	93670	STU_RS14630	0.0	Capsule	Immune modulation	93.13	100.00	WP_011226045
BCDHDMIP_15	92303	93668	STER_RS05300	0.0	Capsule	Immune modulation	92.97	99.85	WP_011681173
BCDHDMIP_15	88602	90062	STR_RS05265	0.0	Capsule	Immune modulation	92.95	100.14	WP_041827043
BCDHDMIP_8	76015	77771	STU_RS16230	0.0	Capsule	Immune modulation	92.43	98.43	WP_011226325
BCDHDMIP_8	78834	80039	STU_RS16240	0.0	Capsule	Immune modulation	92.37	100.00	WP_011226326
BCDHDMIP_13	341214	341807	STR_RS05880	0.0	Capsule	Immune modulation	92.09	100.00	WP_011226149
BCDHDMIP_8	81785	82933	STU_RS16255	0.0	Capsule	Immune modulation	92.00	99.91	WP_041828290
BCDHDMIP_8	80832	81788	STU_RS16250	0.0	Capsule	Immune modulation	91.95	100.00	WP_011226328
BCDHDMIP_15	90063	90794	STU_RS14645	0.0	Capsule	Immune modulation	91.94	100.00	WP_011226048
BCDHDMIP_13	341214	341807	STER_RS06030	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
BCDHDMIP_13	341214	341807	STU_RS15260	0.0	Capsule	Immune modulation	91.92	100.00	WP_011226149
BCDHDMIP_8	77768	78814	STU_RS16235	0.0	Capsule	Immune modulation	91.48	99.34	WP_002948022
BCDHDMIP_13	340345	341214	rfbA	0.0	Capsule	Immune modulation	91.26	100.00	WP_011681286
BCDHDMIP_15	90063	90794	STER_RS05315	0.0	Capsule	Immune modulation	90.98	100.00	WP_011681176
BCDHDMIP_15	90063	90794	STR_RS05260	0.0	Capsule	Immune modulation	90.98	100.00	WP_011227248
BCDHDMIP_15	91505	92245	STER_RS05305	0.0	Capsule	Immune modulation	90.84	99.87	WP_011681174
BCDHDMIP_15	209218	210876	fbp54	0.0	FBPs	Adherence	90.72	99.94	WP_011227179
BCDHDMIP_15	91505	92245	STU_RS14635	0.0	Capsule	Immune modulation	89.89	99.87	WP_011226046
BCDHDMIP_15	91505	92240	STR_RS05250	0.0	Capsule	Immune modulation	89.55	98.00	WP_011227246
BCDHDMIP_12	294981	295886	cbpD	0.0	Autolysin	Exoenzyme	89.07	93.50	WP_082302295
BCDHDMIP_8	386175	387185	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	88.45	99.80	WP_002986042
BCDHDMIP_13	166246	167549	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
BCDHDMIP_15	90803	91495	STU_RS14640	0.0	Capsule	Immune modulation	85.45	99.86	WP_011226047
BCDHDMIP_15	90803	91495	STR_RS05255	0.0	Capsule	Immune modulation	85.16	99.86	WP_011227247
BCDHDMIP_15	90803	91495	STER_RS05310	0.0	Capsule	Immune modulation	84.87	99.86	WP_011681175
BCDHDMIP_15	371479	372240	srtA	0.0	Sortase A	Exoenzyme	84.29	99.74	-
BCDHDMIP_13	342010	343056	rfbB	0.0	Capsule	Immune modulation	81.22	99.90	WP_009659423
BCDHDMIP_12	6871	8154	tig/ropA	0.0	Trigger factor	Stress survival	80.76	99.61	WP_000107753

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
BCDHDMIP_15	363344	362271	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
BCDHDMIP_15	374928	375902	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	95.69	99.09	AAK75326
BCDHDMIP_8	264190	266496	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.54	99.22	AAK74619
BCDHDMIP_15	539079	540560	SPD_0310	0.0	UPF0371 protein SPD_0310	93.32	100.00	ABJ54480
BCDHDMIP_15	344289	342043	metE	0.0	methionine biosynthesis enzymes	93.06	100.00	AAK74738
BCDHDMIP_13	73260	74228	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
BCDHDMIP_1	24540	25511	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
BCDHDMIP_13	314961	316691	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
BCDHDMIP_8	124300	123149	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
BCDHDMIP_8	95818	93830	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
BCDHDMIP_8	586029	584551	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
BCDHDMIP_13	166246	167547	Eno	0.0	enolase	86.44	99.77	ABP90468
BCDHDMIP_8	570673	568781	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
BCDHDMIP_15	339120	340829	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
BCDHDMIP_1	60577	61668	recA	0.0	DNA recombination and repair	84.64	95.36	AAL00560
BCDHDMIP_15	182838	184199	mnmE	0.0	central tRNA-modifying GTPase	82.67	99.56	ABP90420
BCDHDMIP_8	435220	436230	pdh	0.0	pyruvate dehydrogenase	82.49	99.70	ABP91006
BCDHDMIP_13	151840	152730	bglB	5.29e-178	putative phospho--glucosidase	87.88	99.66	AAK33487
BCDHDMIP_15	298290	299240	SP_0676	7.56e-170	transcription facot	81.39	98.45	AAK74821
BCDHDMIP_15	341852	340995	metF	9.14e-170	methionine biosynthesis enzymes	88.11	99.31	AAK74739
BCDHDMIP_15	476964	476293	rr01	1.17e-126	response regulator	84.82	99.56	CAB54566
BCDHDMIP_15	42923	43627	covR	2.72e-126	responder protein	85.53	100.00	AAK71319
BCDHDMIP_15	335151	334480	ciaR	5.85e-125	two component system response regulator	86.16	99.12	AIK75708
BCDHDMIP_15	335151	334483	CiaR	1.08e-124	two-component response regulator	87.44	99.55	AAK74935
BCDHDMIP_15	42923	43627	walR	6.18e-120	DNA-binding response regulator	82.13	100.00	ANC99504
BCDHDMIP_12	146048	146734	CovR	7.04e-120	serves to repress GAS virulence factor-encoding genes	81.66	100.00	ACE75886
BCDHDMIP_1	61841	62236	SpxA2	1.29e-75	transcriptional regulator	91.67	100.00	ERL21461
BCDHDMIP_15	171369	170968	SpxA1	1.25e-69	transcriptional regulator	82.84	100.00	ERL19273
BCDHDMIP_10	12152	12565	GrpE	1.44e-68	protein grpE	81.88	80.59	ABP89267
BCDHDMIP_12	169266	169553	spr0479	8.52e-48	essential gene	85.42	98.97	AAK99283
BCDHDMIP_13	31905	32159	spr1327	1.94e-44	essential gene	92.94	100.00	AAL00131
BCDHDMIP_8	527579	527842	spr0175	3.09e-42	pathogenitcity related	85.23	100.00	AAK98979
BCDHDMIP_8	528403	528669	spr0177	6.85e-41	essential gene	83.15	88.12	AAK98981
BCDHDMIP_12	8321	8812	RopE (M5005_Spy_1611)	1.56e-72	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
BCDHDMIP_8	264190	266490	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.36	98.08	MYN69560
BCDHDMIP_8	471649	470630	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	97.35	100.00	ABJ55451