Genome ID:GCA_002998755.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310717.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OIFGNGMM_10568671569525aadKARO:3002627aadK98.24100.00AL009126.1
OIFGNGMM_10549882551084bltARO:3003006blt99.75100.00L32599.1
OIFGNGMM_11425719426036ykkDARO:3003064ykkD99.05100.00AL009126.1
OIFGNGMM_11425381425719ykkCARO:3003063ykkC100.00100.00AL009126.1
OIFGNGMM_10357632358801bmrARO:3003007bmr99.49100.00M33768.1
OIFGNGMM_12263893266463Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
OIFGNGMM_13187903189549vmlRARO:3004476vmlR98.91100.18NC_000964.3
OIFGNGMM_14155706156299tmrBARO:3003059tmrB98.48100.00AL009126.3
OIFGNGMM_14105150106589lmrBARO:3002813lmrB99.16100.42JYFL01000006.1
OIFGNGMM_149233793257mphKARO:3004541mphK97.39100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OIFGNGMM_93467336049tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.13100.00D12567
OIFGNGMM_10568673569525aadKStreptomycin98.5999.77M26879
OIFGNGMM_149233793257mph(K)Spiramycin, Telithromycin96.96100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OIFGNGMM_93467336046tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.91100.00WP_063856081.1
OIFGNGMM_13187906189549vmlRABC-F type ribosomal protection protein VmlRBLASTX98.91100.00WP_003234144.1
OIFGNGMM_10568674569525aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
OIFGNGMM_149233793254mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
OIFGNGMM_93806138579satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
OIFGNGMM_105963662233rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.71100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OIFGNGMM_10958711350dep/capD0.0CapsuleImmune modulation99.89100.00NP_389723
OIFGNGMM_10154783155424hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
OIFGNGMM_9535463536644capB0.0CapsuleImmune modulation99.75100.00NP_391471
OIFGNGMM_9941630942415dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
OIFGNGMM_9536659537108capC0.0CapsuleImmune modulation99.56100.00NP_391470
OIFGNGMM_9537127538269capA0.0CapsuleImmune modulation99.30100.00NP_391469
OIFGNGMM_9946271953407dhbF0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391076
OIFGNGMM_9942441943637dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
OIFGNGMM_9943666945285dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078
OIFGNGMM_9945313946251dhbB0.0BacillibactinNutritional/Metabolic factor98.30100.00NP_391077

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OIFGNGMM_173179932935tufA0.0elongation factor Tu84.9695.69AHM69299
OIFGNGMM_21133210463pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OIFGNGMM_11737436738212CodY7.55e-125nutrient-responsive regulator81.08100.00ACJ80679
OIFGNGMM_9691150690581ClpP6.35e-99part of proteolytic complex81.0597.44BAB94595
OIFGNGMM_11276697277089spxA15.94e-70redox-responsive transcription factor83.97100.00AAF21893
OIFGNGMM_11276697277089spx3.54e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OIFGNGMM_12064120883SpoVG7.53e-39RNA-binding protein81.4879.41AAT02994
OIFGNGMM_13139924140121CspA9.45e-32cold shock protein90.91100.00CAA62903