Genome ID：GCA_002998795.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	7	17.83

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PJDHMHBC_7	568578	569432	aadK	ARO:3002627	aadK	98.24	100.00	AL009126.1
PJDHMHBC_7	549789	550991	blt	ARO:3003006	blt	99.75	100.00	L32599.1
PJDHMHBC_6	425762	426079	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
PJDHMHBC_6	425424	425762	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PJDHMHBC_8	401721	403367	vmlR	ARO:3004476	vmlR	98.91	100.18	NC_000964.3
PJDHMHBC_7	357539	358708	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
PJDHMHBC_8	155706	156299	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
PJDHMHBC_8	105150	106589	lmrB	ARO:3002813	lmrB	99.16	100.42	JYFL01000006.1
PJDHMHBC_8	92337	93257	mphK	ARO:3004541	mphK	97.39	100.00	CP010314.1
PJDHMHBC_9	27474	30044	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PJDHMHBC_5	34673	36049	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	99.13	100.00	D12567
PJDHMHBC_7	568580	569432	aadK	Streptomycin	98.59	99.77	M26879
PJDHMHBC_8	92337	93257	mph(K)	Spiramycin, Telithromycin	96.96	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PJDHMHBC_5	34673	36046	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
PJDHMHBC_8	401724	403367	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.91	100.00	WP_003234144.1
PJDHMHBC_7	568581	569432	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
PJDHMHBC_8	92337	93254	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.39	100.00	WP_003246254.1
PJDHMHBC_5	38061	38579	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
PJDHMHBC_7	59543	62140	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.71	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PJDHMHBC_7	9494	11257	dep/capD	0.0	Capsule	Immune modulation	99.89	100.00	NP_389723
PJDHMHBC_7	154690	155331	hlyIII	0.0	Hemolysin III	Exotoxin	99.84	100.00	NP_390062
PJDHMHBC_5	535210	536391	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
PJDHMHBC_5	941377	942162	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.62	100.00	NP_391080
PJDHMHBC_5	536406	536855	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
PJDHMHBC_5	536874	538016	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
PJDHMHBC_5	946018	953154	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.17	100.00	NP_391076
PJDHMHBC_5	942188	943384	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.91	100.00	NP_391079
PJDHMHBC_5	943413	945032	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.52	100.00	NP_391078
PJDHMHBC_5	945060	945998	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.30	100.00	NP_391077

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PJDHMHBC_11	31799	32935	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PJDHMHBC_13	11332	10463	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PJDHMHBC_6	737479	738255	CodY	8.31e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
PJDHMHBC_5	690897	690328	ClpP	6.34e-99	part of proteolytic complex	81.05	97.44	BAB94595
PJDHMHBC_6	276740	277132	spxA1	6.53e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
PJDHMHBC_6	276740	277132	spx	3.90e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
PJDHMHBC_12	20641	20883	SpoVG	7.53e-39	RNA-binding protein	81.48	79.41	AAT02994
PJDHMHBC_8	353742	353939	CspA	1.87e-31	cold shock protein	90.91	100.00	CAA62903