Genome ID:GCA_003149695.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3234.69

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PCEOLIPN_1530423531472clbAARO:3002814clbA97.13100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PCEOLIPN_1530423531458cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin87.7498.67KR610408
PCEOLIPN_126097612611137tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.36100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PCEOLIPN_1530423531466clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX97.4199.71WP_012116915.1
PCEOLIPN_126097672611137tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.6599.78WP_003242953.1
PCEOLIPN_118967731899367rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.34100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PCEOLIPN_135341883535369capB0.0CapsuleImmune modulation81.8799.66NP_391471
PCEOLIPN_135337243534173capC1.50e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PCEOLIPN_1133819134955tufA0.0elongation factor Tu86.8195.69AHM69299
PCEOLIPN_11902819897pdxS3.38e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
PCEOLIPN_116913201692096CodY4.79e-124nutrient-responsive regulator81.08100.00ACJ80679