Genome ID:GCA_003265285.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 10 | 2 | 13.60 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BPNKCPDM_1 | 2837454 | 2838275 | aadK | ARO:3002627 | aadK | 98.17 | 96.13 | AL009126.1 |
| BPNKCPDM_1 | 2818845 | 2820047 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| BPNKCPDM_1 | 1459541 | 1459858 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| BPNKCPDM_1 | 397365 | 397958 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| BPNKCPDM_1 | 346847 | 348280 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| BPNKCPDM_1 | 334042 | 334962 | mphK | ARO:3004541 | mphK | 99.35 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BPNKCPDM_1 | 334042 | 334962 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
| BPNKCPDM_1 | 2837456 | 2838307 | aadK | Streptomycin | 99.18 | 99.65 | M26879 |
| BPNKCPDM_1 | 4297565 | 4298939 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.91 | 99.85 | D12567 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BPNKCPDM_1 | 334042 | 334959 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.35 | 100.00 | WP_003246254.1 |
| BPNKCPDM_1 | 2837457 | 2838278 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.54 | 96.48 | WP_003229862.1 |
| BPNKCPDM_1 | 4295085 | 4295603 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| BPNKCPDM_1 | 2266406 | 2268913 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.86 | 96.54 | WP_087347987.1 |
| BPNKCPDM_1 | 641112 | 642104 | vmlR | ABC-F type ribosomal protection protein VmlR | PARTIALX | 97.89 | 60.51 | WP_003234144.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BPNKCPDM_1 | 3389090 | 3390028 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| BPNKCPDM_1 | 3390056 | 3391675 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| BPNKCPDM_1 | 2376612 | 2377253 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| BPNKCPDM_1 | 2216536 | 2218299 | dep/capD | 0.0 | Capsule | Immune modulation | 99.94 | 100.00 | NP_389723 |
| BPNKCPDM_1 | 3391704 | 3392900 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.67 | 100.00 | NP_391079 |
| BPNKCPDM_1 | 3798347 | 3799527 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 99.92 | NP_391471 |
| BPNKCPDM_1 | 3796725 | 3797865 | capA | 0.0 | Capsule | Immune modulation | 99.47 | 99.83 | NP_391469 |
| BPNKCPDM_1 | 3392926 | 3393711 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| BPNKCPDM_1 | 3797884 | 3798333 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| BPNKCPDM_1 | 3381938 | 3389070 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.86 | 99.94 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BPNKCPDM_1 | 132226 | 133362 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| BPNKCPDM_1 | 3644050 | 3644619 | ClpP | 2.60e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |