Genome ID：GCA_003336895.2

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
15	10	8	19.72

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
IFIAKPCA_1	1652087	1652425	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
IFIAKPCA_1	1651770	1652087	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
IFIAKPCA_1	678288	679457	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
IFIAKPCA_1	455950	457152	blt	ARO:3003006	blt	100.00	100.00	L32599.1
IFIAKPCA_1	437589	438443	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
IFIAKPCA_3	391573	393216	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
IFIAKPCA_2	358681	359418	ErmB	ARO:3000375	ErmB	98.78	98.79	AF242872.1
IFIAKPCA_2	357336	358196	TEM-1	ARO:3000873	TEM-1	100.00	100.00	AL513383.1
IFIAKPCA_3	162965	163558	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
IFIAKPCA_3	112462	113901	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
IFIAKPCA_3	99647	100567	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
IFIAKPCA_4	27372	29942	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
IFIAKPCA_1	437589	438443	aadK	Streptomycin	100.00	100.00	M26879
IFIAKPCA_2	357336	358196	blaTEM-1A	Amoxicillin, Ampicillin, Cephalothin, Piperacillin, Ticarcillin	100.00	100.00	HM749966
IFIAKPCA_2	358681	359418	erm(B)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	U18931
IFIAKPCA_3	99647	100567	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
IFIAKPCA_2	36393	37769	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
IFIAKPCA_1	437589	438440	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
IFIAKPCA_2	357339	358196	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	ALLELEX	100.00	100.00	WP_000027057.1
IFIAKPCA_2	358681	359415	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	EXACTX	100.00	100.00	WP_002292226.1
IFIAKPCA_3	99647	100564	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
IFIAKPCA_2	39769	40287	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
IFIAKPCA_2	36393	37766	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
IFIAKPCA_3	391576	393216	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
IFIAKPCA_1	985795	988389	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
IFIAKPCA_2	535592	536734	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
IFIAKPCA_2	533928	535109	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
IFIAKPCA_2	535124	535573	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
IFIAKPCA_1	1033284	1035047	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
IFIAKPCA_2	942258	943043	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
IFIAKPCA_2	945941	946879	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
IFIAKPCA_2	943069	944265	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
IFIAKPCA_2	944294	945913	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
IFIAKPCA_2	946899	954035	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
IFIAKPCA_1	878183	878824	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
IFIAKPCA_2	351644	354685	lacZ	0.0	beta-galactosidase	99.51	99.02	AAA24053
IFIAKPCA_5	31779	32915	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
IFIAKPCA_7	4354	5223	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
IFIAKPCA_1	1338822	1338046	CodY	1.69e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
IFIAKPCA_2	688320	687751	ClpP	6.35e-99	part of proteolytic complex	81.05	97.44	BAB94595
IFIAKPCA_1	1801248	1800856	spxA1	4.99e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
IFIAKPCA_6	34757	34515	SpoVG	3.91e-38	RNA-binding protein	80.25	79.41	AAT02994
IFIAKPCA_3	346101	346298	CspA	1.82e-31	cold shock protein	90.91	100.00	CAA62903