Genome ID：GCA_003417435.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
NPEPGNMH_3	678313	679482	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
NPEPGNMH_2	591792	592130	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
NPEPGNMH_2	591475	591792	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
NPEPGNMH_3	455959	457161	blt	ARO:3003006	blt	100.00	100.00	L32599.1
NPEPGNMH_3	437598	438452	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
NPEPGNMH_4	276660	279230	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3
NPEPGNMH_6	163018	163611	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
NPEPGNMH_6	112515	113954	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
NPEPGNMH_6	99700	100620	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
NPEPGNMH_8	29251	30894	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
NPEPGNMH_3	437598	438452	aadK	Streptomycin	100.00	100.00	M26879
NPEPGNMH_6	99700	100620	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
NPEPGNMH_1	1008757	1010133	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
NPEPGNMH_3	437598	438449	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
NPEPGNMH_6	99700	100617	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
NPEPGNMH_1	1006239	1006757	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
NPEPGNMH_1	1008760	1010133	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
NPEPGNMH_8	29251	30891	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
NPEPGNMH_5	192930	195524	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
NPEPGNMH_1	519262	520404	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
NPEPGNMH_1	520887	522068	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
NPEPGNMH_1	520423	520872	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
NPEPGNMH_5	240419	242182	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
NPEPGNMH_1	112916	113701	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
NPEPGNMH_1	109080	110018	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
NPEPGNMH_1	111694	112890	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
NPEPGNMH_1	110046	111665	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
NPEPGNMH_1	101924	109060	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
NPEPGNMH_3	878201	878842	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
NPEPGNMH_9	31719	32855	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
NPEPGNMH_11	4392	5261	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
NPEPGNMH_2	278506	277730	CodY	8.25e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
NPEPGNMH_1	367642	368211	ClpP	6.29e-99	part of proteolytic complex	81.05	97.44	BAB94595
NPEPGNMH_2	740957	740565	spxA1	2.45e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
NPEPGNMH_10	20889	21131	SpoVG	7.56e-39	RNA-binding protein	81.48	79.41	AAT02994
NPEPGNMH_8	76373	76176	CspA	3.38e-32	cold shock protein	90.91	100.00	CAA62903
NPEPGNMH_3	866238	866044	CspD	5.70e-28	cold shock protein	81.54	98.48	CAC99957