Genome ID:GCA_003426125.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GGHOCBNH_125427252543579aadKARO:3002627aadK97.54100.00AL009126.1
GGHOCBNH_125235562524758bltARO:3003006blt99.75100.00L32599.1
GGHOCBNH_122969802298149bmrARO:3003007bmr99.74100.00M33768.1
GGHOCBNH_113284171328734ykkDARO:3003064ykkD99.05100.00AL009126.1
GGHOCBNH_113280791328417ykkCARO:3003063ykkC100.00100.00AL009126.1
GGHOCBNH_1832030834600Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
GGHOCBNH_1532310533953vmlRARO:3004476vmlR98.35100.00NC_000964.3
GGHOCBNH_1228716230149lmrBARO:3002813lmrB99.16100.00JYFL01000006.1
GGHOCBNH_1215900216820mphKARO:3004541mphK97.71100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GGHOCBNH_140248664026243tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.93100.00X08034
GGHOCBNH_125427272543579aadKStreptomycin98.4899.77M26879
GGHOCBNH_1215900216820mph(K)Spiramycin, Telithromycin97.50100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GGHOCBNH_140251464026243tet(L)tetracycline efflux MFS transporter Tet(L)PARTIALX99.1879.91WP_003242953.1
GGHOCBNH_1532313533953vmlRABC-F type ribosomal protection protein VmlRBLASTX98.35100.00WP_003234144.1
GGHOCBNH_1215900216817mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
GGHOCBNH_125427282543579aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
GGHOCBNH_140223494022867satAstreptothricin N-acetyltransferase SatABLASTX89.60100.00WP_003242546.1
GGHOCBNH_119921691994766rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.40100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GGHOCBNH_135316253532806capB0.0CapsuleImmune modulation99.66100.00NP_391471
GGHOCBNH_119456121947375dep/capD0.0CapsuleImmune modulation99.49100.00NP_389723
GGHOCBNH_120968102097451hlyIII0.0Hemolysin IIIExotoxin99.38100.00NP_390062
GGHOCBNH_131186263119411dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GGHOCBNH_131147903115728dhbB0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391077
GGHOCBNH_131174043118600dhbC0.0BacillibactinNutritional/Metabolic factor99.08100.00NP_391079
GGHOCBNH_135300003531142capA0.0CapsuleImmune modulation98.95100.00NP_391469
GGHOCBNH_135311613531610capC0.0CapsuleImmune modulation98.67100.00NP_391470
GGHOCBNH_131157563117375dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078
GGHOCBNH_131076343114770dhbF0.0BacillibactinNutritional/Metabolic factor97.90100.00NP_391076

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GGHOCBNH_18717188307tufA0.0elongation factor Tu84.9695.69AHM69299
GGHOCBNH_1866434867303pdxS3.02e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GGHOCBNH_116391261639902CodY3.29e-124nutrient-responsive regulator81.08100.00ACJ80679
GGHOCBNH_133702773370846ClpP2.44e-98part of proteolytic complex81.0597.44BAB94595