Genome ID:GCA_003436475.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GNEHDEKP_45 | 68949 | 69857 | CblA-1 | ARO:3002999 | CblA-1 | 97.97 | 102.03 | GQ343019.1 |
| GNEHDEKP_5 | 40332 | 42257 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| GNEHDEKP_27 | 1386 | 2201 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
| GNEHDEKP_32 | 1100 | 1924 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
| GNEHDEKP_32 | 97 | 897 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GNEHDEKP_32 | 1100 | 1924 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| GNEHDEKP_27 | 1386 | 2201 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| GNEHDEKP_5 | 40332 | 42257 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| GNEHDEKP_32 | 97 | 897 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GNEHDEKP_32 | 1103 | 1924 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| GNEHDEKP_27 | 1389 | 2201 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| GNEHDEKP_5 | 40332 | 42254 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| GNEHDEKP_32 | 97 | 894 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| GNEHDEKP_45 | 68949 | 69836 | cblA | CblA family class A beta-lactamase | BLASTX | 97.97 | 100.00 | WP_005827792.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||