Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMMCGOHE_78 | 53745 | 54560 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
| AMMCGOHE_24 | 1132 | 3057 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| AMMCGOHE_64 | 475 | 2025 | tet(Q) | ARO:3000191 | tet(Q) | 92.99 | 78.54 | Z21523.1 |
| AMMCGOHE_24 | 3 | 845 | ErmF | ARO:3000498 | ErmF | 98.50 | 105.26 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AMMCGOHE_78 | 53745 | 54560 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| AMMCGOHE_24 | 45 | 845 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMMCGOHE_78 | 53748 | 54560 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| AMMCGOHE_24 | 45 | 842 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| AMMCGOHE_64 | 529 | 2025 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIALX | 95.79 | 74.88 | WP_063856407.1 |
| AMMCGOHE_24 | 1132 | 3054 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AMMCGOHE_12 | 266196 | 267776 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |