Genome ID:GCA_003463555.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JIAAGMPJ_50 | 52408 | 53310 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| JIAAGMPJ_50 | 30155 | 31360 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| JIAAGMPJ_56 | 15603 | 17528 | tet(Q) | ARO:3000191 | tet(Q) | 96.88 | 97.56 | Z21523.1 |
| JIAAGMPJ_47 | 1492 | 2454 | CfxA3 | ARO:3003003 | CfxA3 | 99.38 | 99.69 | AF472622.2 |
| JIAAGMPJ_128 | 1191 | 1991 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JIAAGMPJ_50 | 52408 | 53310 | cepA | Unknown Beta-lactam | 100.00 | 100.00 | FR688022 |
| JIAAGMPJ_56 | 15603 | 17528 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.95 | 100.00 | X58717 |
| JIAAGMPJ_47 | 1492 | 2454 | cfxA3 | Ampicillin | 99.59 | 99.69 | AF472622 |
| JIAAGMPJ_47 | 1492 | 2454 | cfxA4 | Unknown Beta-lactam | 99.59 | 99.69 | AY769933 |
| JIAAGMPJ_47 | 1492 | 2454 | cfxA5 | Unknown Beta-lactam | 99.59 | 99.69 | AY769934 |
| JIAAGMPJ_128 | 1191 | 1991 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JIAAGMPJ_50 | 52408 | 53307 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
| JIAAGMPJ_50 | 29621 | 30130 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| JIAAGMPJ_56 | 15606 | 17528 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.84 | 100.00 | WP_004293868.1 |
| JIAAGMPJ_50 | 30158 | 31360 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| JIAAGMPJ_47 | 1495 | 2454 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.38 | 100.00 | WP_004339683.1 |
| JIAAGMPJ_128 | 1191 | 1988 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||