Genome ID:GCA_003468145.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LANJJOEP_18 | 24660 | 25562 | cepA | ARO:3003559 | cepA | 99.33 | 100.00 | U05883.1 |
| LANJJOEP_35 | 5741 | 7684 | tet(Q) | ARO:3000191 | tet(Q) | 99.69 | 98.63 | Z21523.1 |
| LANJJOEP_7 | 103 | 903 | ErmF | ARO:3000498 | ErmF | 98.12 | 100.00 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LANJJOEP_35 | 5789 | 7685 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 98.49 | Z21523 |
| LANJJOEP_18 | 24660 | 25562 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
| LANJJOEP_18 | 24660 | 25562 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | L13472 |
| LANJJOEP_7 | 103 | 903 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.38 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LANJJOEP_35 | 5789 | 7684 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.68 | 98.60 | WP_002560998.1 |
| LANJJOEP_18 | 24660 | 25559 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_005795628.1 |
| LANJJOEP_7 | 103 | 900 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.50 | 100.00 | WP_002682030.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||