Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HGFFJGFI_12 | 157643 | 158608 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| HGFFJGFI_26 | 16495 | 18156 | tet(Q) | ARO:3000191 | tet(Q) | 95.84 | 84.17 | Z21523.1 |
| HGFFJGFI_28 | 14576 | 16237 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 84.17 | Z21523.1 |
| HGFFJGFI_30 | 3643 | 4500 | ErmF | ARO:3000498 | ErmF | 98.50 | 107.14 | M17124.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HGFFJGFI_12 | 157643 | 158608 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| HGFFJGFI_28 | 14576 | 16237 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 86.29 | Z21523 |
| HGFFJGFI_30 | 3643 | 4443 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HGFFJGFI_12 | 157646 | 158608 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| HGFFJGFI_28 | 14579 | 16237 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 100.00 | 86.27 | WP_002560998.1 |
| HGFFJGFI_26 | 16498 | 18156 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 99.46 | 86.27 | WP_063856407.1 |
| HGFFJGFI_30 | 3646 | 4443 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HGFFJGFI_4 | 111954 | 113534 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |