Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPMECFNC_43 | 3566 | 4429 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| PPMECFNC_43 | 2254 | 3390 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| PPMECFNC_43 | 916 | 2055 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| PPMECFNC_27 | 67 | 1032 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
| PPMECFNC_68 | 2 | 1669 | tet(Q) | ARO:3000191 | tet(Q) | 95.86 | 84.47 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PPMECFNC_27 | 67 | 1032 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
| PPMECFNC_68 | 1 | 1669 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.82 | 86.66 | L33696 |
| PPMECFNC_43 | 2224 | 3390 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
| PPMECFNC_43 | 52 | 610 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.82 | 69.79 | M62487 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPMECFNC_43 | 3566 | 4426 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| PPMECFNC_27 | 67 | 1029 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
| PPMECFNC_43 | 916 | 2052 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| PPMECFNC_43 | 2224 | 3387 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| PPMECFNC_68 | 2 | 1666 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 99.46 | 86.58 | WP_063856407.1 |
| PPMECFNC_43 | 53 | 610 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 99.46 | 69.92 | WP_063844771.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PPMECFNC_2 | 72902 | 74482 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |