Genome ID：GCA_003546075.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
4	2	6	7.48

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
FPHHPGEP_4	48102	49148	clbA	ARO:3002814	clbA	92.77	99.71	CP006845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
FPHHPGEP_4	48105	49148	cfr(B)	Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin	88.90	99.33	KR610408
FPHHPGEP_3	164280	165656	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	87.36	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
FPHHPGEP_4	48105	49148	clbA	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA	BLASTX	92.24	99.71	WP_012116915.1
FPHHPGEP_3	164280	165650	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	87.09	99.78	WP_003242953.1
FPHHPGEP_4	50899	51417	satA	streptothricin N-acetyltransferase SatA	BLASTX	82.66	100.00	WP_003242546.1
FPHHPGEP_1	903821	906418	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.06	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
FPHHPGEP_2	497767	498948	capB	0.0	Capsule	Immune modulation	81.87	99.66	NP_391471
FPHHPGEP_2	497303	497752	capC	3.25e-114	Capsule	Immune modulation	83.59	99.78	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
FPHHPGEP_8	27771	26635	tufA	0.0	elongation factor Tu	86.54	95.69	AHM69299
FPHHPGEP_11	4452	5321	pdxS	6.43e-153	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	84.83	98.31	ACE61268
FPHHPGEP_1	702698	703474	CodY	8.76e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
FPHHPGEP_1	260548	260940	spxA1	1.38e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
FPHHPGEP_4	65650	65453	CspA	5.86e-32	cold shock protein	92.42	100.00	CAA62903
FPHHPGEP_3	505158	504964	CspD	1.57e-27	cold shock protein	80.00	98.48	CAC99957
FPHHPGEP_3	505158	504961	CspB	3.25e-27	cold shock protein	80.30	100.00	CAD00094
FPHHPGEP_4	65650	65456	CspR	2.91e-26	cold shock protein	80.00	98.48	AAO82613