Genome ID：GCA_003665235.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
11	10	4	15.39

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
EFMLCPHF_1	4016501	4017094	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
EFMLCPHF_1	3967415	3968848	lmrB	ARO:3002813	lmrB	99.79	100.00	JYFL01000006.1
EFMLCPHF_1	3954600	3955520	mphK	ARO:3004541	mphK	98.68	100.00	CP010314.1
EFMLCPHF_1	2094729	2095583	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
EFMLCPHF_1	2076253	2077455	blt	ARO:3003006	blt	99.25	100.00	L32599.1
EFMLCPHF_1	969564	969881	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
EFMLCPHF_1	969226	969564	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
EFMLCPHF_1	466150	468720	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
EFMLCPHF_1	2094729	2095583	aadK	Streptomycin	98.83	100.00	M26879
EFMLCPHF_1	3954600	3955520	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
EFMLCPHF_1	3954600	3955508	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.68	99.02	WP_003246254.1
EFMLCPHF_1	2094732	2095583	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
EFMLCPHF_1	95822	97429	vmlR	ABC-F type ribosomal protection protein VmlR	INTERNAL_STOP	95.61	100.00	WP_003234144.1
EFMLCPHF_1	3652788	3653306	satA	streptothricin N-acetyltransferase SatA	BLASTX	91.33	100.00	WP_003242546.1
EFMLCPHF_1	1404703	1407300	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.48	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
EFMLCPHF_1	3167667	3168848	capB	0.0	Capsule	Immune modulation	99.49	100.00	NP_391471
EFMLCPHF_1	2655780	2656565	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.49	100.00	NP_391080
EFMLCPHF_1	3166042	3167184	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
EFMLCPHF_1	3167203	3167652	capC	0.0	Capsule	Immune modulation	99.11	100.00	NP_391470
EFMLCPHF_1	2654558	2655754	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.08	100.00	NP_391079
EFMLCPHF_1	2651944	2652882	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.04	100.00	NP_391077
EFMLCPHF_1	1458366	1460129	dep/capD	0.0	Capsule	Immune modulation	98.98	100.00	NP_389723
EFMLCPHF_1	1687532	1688173	hlyIII	0.0	Hemolysin III	Exotoxin	98.91	100.00	NP_390062
EFMLCPHF_1	2644788	2651924	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.66	100.00	NP_391076
EFMLCPHF_1	2652910	2654529	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.04	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
EFMLCPHF_1	3814808	3815944	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
EFMLCPHF_1	3700912	3701781	pdxS	3.11e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
EFMLCPHF_1	1283285	1284061	CodY	3.39e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
EFMLCPHF_1	3008336	3008905	ClpP	2.52e-98	part of proteolytic complex	81.05	97.44	BAB94595