Genome ID:GCA_003710285.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 8 | 17.55 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OMJAKBOI_1 | 518347 | 518685 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| OMJAKBOI_1 | 518030 | 518347 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| OMJAKBOI_29 | 404277 | 405920 | vmlR | ARO:3004476 | vmlR | 96.71 | 100.00 | NC_000964.3 |
| OMJAKBOI_23 | 339413 | 340582 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| OMJAKBOI_29 | 153698 | 154291 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| OMJAKBOI_23 | 139831 | 141033 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| OMJAKBOI_23 | 122926 | 123780 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| OMJAKBOI_29 | 103148 | 104587 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| OMJAKBOI_29 | 90337 | 91257 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
| OMJAKBOI_31 | 27397 | 29967 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OMJAKBOI_23 | 122926 | 123778 | aadK | Streptomycin | 98.83 | 99.77 | M26879 |
| OMJAKBOI_29 | 90337 | 91257 | mph(K) | Spiramycin, Telithromycin | 98.15 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OMJAKBOI_29 | 90337 | 91254 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| OMJAKBOI_23 | 122926 | 123777 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| OMJAKBOI_29 | 404280 | 405920 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 96.71 | 100.00 | WP_003234144.1 |
| OMJAKBOI_7 | 10959 | 11477 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.64 | 100.00 | WP_003242546.1 |
| OMJAKBOI_32 | 178212 | 180809 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.94 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OMJAKBOI_12 | 103599 | 104384 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.87 | 100.00 | NP_391080 |
| OMJAKBOI_12 | 517410 | 518591 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| OMJAKBOI_12 | 99763 | 100701 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| OMJAKBOI_12 | 516946 | 517395 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| OMJAKBOI_12 | 102377 | 103573 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391079 |
| OMJAKBOI_12 | 515785 | 516927 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| OMJAKBOI_32 | 128849 | 130612 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| OMJAKBOI_32 | 279007 | 279648 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| OMJAKBOI_12 | 92607 | 99743 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.46 | 100.00 | NP_391076 |
| OMJAKBOI_12 | 100729 | 102348 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.41 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMJAKBOI_6 | 31716 | 32852 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| OMJAKBOI_9 | 4341 | 5210 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OMJAKBOI_1 | 206498 | 205722 | CodY | 4.54e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OMJAKBOI_12 | 356058 | 356627 | ClpP | 3.20e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| OMJAKBOI_30 | 114720 | 114328 | spxA1 | 2.50e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| OMJAKBOI_30 | 114720 | 114328 | spx | 1.49e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| OMJAKBOI_8 | 34653 | 34411 | SpoVG | 7.50e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| OMJAKBOI_29 | 351293 | 351490 | CspA | 1.88e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| OMJAKBOI_32 | 290869 | 291063 | CspD | 7.79e-28 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| OMJAKBOI_32 | 290869 | 291066 | CspB | 1.62e-27 | cold shock protein | 80.30 | 100.00 | CAD00094 |