Genome ID：GCA_003833295.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	7	17.83

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LIAGCGNL_9	693874	695043	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LIAGCGNL_9	447696	448898	blt	ARO:3003006	blt	99.25	100.00	L32599.1
LIAGCGNL_9	427793	428647	aadK	ARO:3002627	aadK	98.94	100.00	AL009126.1
LIAGCGNL_14	424813	425130	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
LIAGCGNL_14	424475	424813	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LIAGCGNL_19	262815	265385	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.65	100.00	AL009126.3
LIAGCGNL_23	109518	110438	mphK	ARO:3004541	mphK	97.71	100.00	CP010314.1
LIAGCGNL_23	96186	97625	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
LIAGCGNL_23	46532	47125	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
LIAGCGNL_21	29062	30708	vmlR	ARO:3004476	vmlR	98.36	100.18	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LIAGCGNL_9	427793	428647	aadK	Streptomycin	98.95	100.00	M26879
LIAGCGNL_1	39548	40924	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.84	100.00	D12567
LIAGCGNL_23	109518	110438	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LIAGCGNL_9	427793	428644	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.94	100.00	WP_003229862.1
LIAGCGNL_1	39548	40921	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
LIAGCGNL_21	29062	30705	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.36	100.00	WP_003234144.1
LIAGCGNL_23	109521	110438	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	97.71	100.00	WP_003246254.1
LIAGCGNL_1	42892	43410	satA	streptothricin N-acetyltransferase SatA	BLASTX	93.06	100.00	WP_003242546.1
LIAGCGNL_9	1004894	1007491	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.83	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LIAGCGNL_1	526987	528168	capB	0.0	Capsule	Immune modulation	99.58	100.00	NP_391471
LIAGCGNL_9	895123	895764	hlyIII	0.0	Hemolysin III	Exotoxin	99.53	100.00	NP_390062
LIAGCGNL_1	955791	956987	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.42	100.00	NP_391079
LIAGCGNL_1	954980	955765	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LIAGCGNL_1	528183	528632	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
LIAGCGNL_9	1051618	1053381	dep/capD	0.0	Capsule	Immune modulation	99.04	100.00	NP_389723
LIAGCGNL_1	958663	959601	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.94	100.00	NP_391077
LIAGCGNL_1	528651	529793	capA	0.0	Capsule	Immune modulation	98.78	100.00	NP_391469
LIAGCGNL_1	959621	966757	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391076
LIAGCGNL_1	957016	958635	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.04	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LIAGCGNL_26	28106	26970	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LIAGCGNL_4	11305	10436	pdxS	1.13e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LIAGCGNL_14	733614	734390	CodY	7.62e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LIAGCGNL_1	680553	679984	ClpP	6.43e-99	part of proteolytic complex	81.05	97.44	BAB94595
LIAGCGNL_14	277870	278262	spxA1	5.99e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
LIAGCGNL_14	277870	278262	spx	3.57e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LIAGCGNL_2	20614	20856	SpoVG	7.52e-39	RNA-binding protein	81.48	79.41	AAT02994
LIAGCGNL_21	78614	78417	CspA	9.59e-32	cold shock protein	90.91	100.00	CAA62903