Genome ID:GCA_004101945.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DOKCGBOE_136725373673391aadKARO:3002627aadK97.54100.00AL009126.1
DOKCGBOE_136554683656670bltARO:3003006blt99.75100.00L32599.1
DOKCGBOE_134294153430584bmrARO:3003007bmr99.49100.00M33768.1
DOKCGBOE_124812232481540ykkDARO:3003064ykkD98.10100.00AL009126.1
DOKCGBOE_124808852481223ykkCARO:3003063ykkC98.21100.00AL009126.1
DOKCGBOE_120006092003179Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
DOKCGBOE_114572971457890tmrBARO:3003059tmrB97.97100.00AL009126.3
DOKCGBOE_114067391408172lmrBARO:3002813lmrB98.95100.00JYFL01000006.1
DOKCGBOE_113804581381378mphKARO:3004541mphK98.04100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DOKCGBOE_110670481068424tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.93100.00X08034
DOKCGBOE_136725393673391aadKStreptomycin98.4899.77M26879
DOKCGBOE_113804581381378mph(K)Spiramycin, Telithromycin97.83100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DOKCGBOE_110670511068424tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.78100.00WP_003242953.1
DOKCGBOE_113804581381375mphKmacrolide 2'-phosphotransferase MphKBLASTX98.04100.00WP_003246254.1
DOKCGBOE_116973441698984vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.62100.00WP_003234144.1
DOKCGBOE_136725403673391aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
DOKCGBOE_110645771065095satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
DOKCGBOE_130708393073436rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.83100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DOKCGBOE_1570469571650capB0.0CapsuleImmune modulation99.66100.00NP_391471
DOKCGBOE_1131715132500dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
DOKCGBOE_1127879128817dhbB0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391077
DOKCGBOE_1130493131689dhbC0.0BacillibactinNutritional/Metabolic factor99.08100.00NP_391079
DOKCGBOE_1120723127859dhbF0.0BacillibactinNutritional/Metabolic factor99.08100.00NP_391076
DOKCGBOE_132267463227387hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
DOKCGBOE_1568844569986capA0.0CapsuleImmune modulation98.86100.00NP_391469
DOKCGBOE_130181723019935dep/capD0.0CapsuleImmune modulation98.81100.00NP_389723
DOKCGBOE_1570005570454capC0.0CapsuleImmune modulation98.67100.00NP_391470
DOKCGBOE_1128845130464dhbE0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DOKCGBOE_112214111222547tufA0.0elongation factor Tu85.7595.69AHM69299
DOKCGBOE_111121651113034pdxS3.05e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
DOKCGBOE_127991652799941CodY3.33e-124nutrient-responsive regulator81.08100.00ACJ80679
DOKCGBOE_1412478413047ClpP2.47e-98part of proteolytic complex81.0597.44BAB94595