Genome ID:GCA_004102885.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 1 | 4 | 4.58 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNCNFNDC_21 | 187 | 552 | BRP(MBL) | ARO:3001205 | BRP(MBL) | 100.00 | 100.00 | KC503911.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNCNFNDC_21 | 556 | 1278 | blaNDM-5 | Amoxicillin, Amoxicillin+Clavulanic acid, Ampicillin, Ampicillin+Clavulanic acid, Cefepime, Cefixime, Cefotaxime, Cefoxitin, Ceftazidime, Ertapenem, Imipenem, Meropenem, Piperacillin, Piperacillin+Tazobactam, Temocillin | 100.00 | 88.93 | JN104597 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNCNFNDC_21 | 190 | 552 | ble | bleomycin binding protein Ble-MBL | EXACTX | 100.00 | 100.00 | WP_004201167.1 |
| FNCNFNDC_21 | 559 | 1278 | blaNDM | NDM family subclass B1 metallo-beta-lactamase | PARTIALX | 100.00 | 88.89 | WP_023408309.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNCNFNDC_41 | 252 | 466 | virulence_ecoli | traT | Outer membrane protein complement resistance | 100.0 | 70.96 | UEKA01000045 |
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNCNFNDC_21 | 1278 | 559 | NDM-1 | 2.37e-159 | carbapenemase | 99.17 | 88.89 | AJD76950 |
| FNCNFNDC_1 | 447959 | 447255 | WalR | 3.10e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FNCNFNDC_34 | 260748 | 260942 | CspR | 1.54e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FNCNFNDC_34 | 260748 | 260945 | CspA | 2.37e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
| FNCNFNDC_47 | 401 | 300 | int | 6.91e-15 | integrase | 89.19 | 97.30 | CAB40914 |