Genome ID:GCA_004103595.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210416.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IBMOCDID_126169672617821aadKARO:3002627aadK97.89100.00AL009126.1
IBMOCDID_125874432588645bltARO:3003006blt100.00100.00L32599.1
IBMOCDID_123933732394542bmrARO:3003007bmr99.74100.00M33768.1
IBMOCDID_114175661417883ykkDARO:3003064ykkD99.05100.00AL009126.1
IBMOCDID_114172281417566ykkCARO:3003063ykkC100.00100.00AL009126.1
IBMOCDID_1955844958414Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
IBMOCDID_1627619629262vmlRARO:3004476vmlR98.90100.00NC_000964.3
IBMOCDID_1314655316088lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
IBMOCDID_1301840302760mphKARO:3004541mphK96.41100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IBMOCDID_141053474106723tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.84100.00D12567
IBMOCDID_126169672617821aadKStreptomycin98.60100.00M26879
IBMOCDID_1301840302760mph(K)Spiramycin, Telithromycin96.6499.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IBMOCDID_141053504106723tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.91100.00WP_063856081.1
IBMOCDID_1627622629262vmlRABC-F type ribosomal protection protein VmlRBLASTX98.90100.00WP_003234144.1
IBMOCDID_126169702617821aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
IBMOCDID_1301840302757mphKmacrolide 2'-phosphotransferase MphKBLASTX96.41100.00WP_003246254.1
IBMOCDID_141031604103678satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1
IBMOCDID_120930602095657rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.29100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IBMOCDID_131701663171104dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
IBMOCDID_136168523618033capB0.0CapsuleImmune modulation99.66100.00NP_391471
IBMOCDID_121905532191194hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
IBMOCDID_131727803173976dhbC0.0BacillibactinNutritional/Metabolic factor99.42100.00NP_391079
IBMOCDID_131740023174787dhbA0.0BacillibactinNutritional/Metabolic factor99.24100.00NP_391080
IBMOCDID_136152273616369capA0.0CapsuleImmune modulation99.21100.00NP_391469
IBMOCDID_120472712049034dep/capD0.0CapsuleImmune modulation99.09100.00NP_389723
IBMOCDID_136163883616837capC0.0CapsuleImmune modulation98.67100.00NP_391470
IBMOCDID_131711323172751dhbE0.0BacillibactinNutritional/Metabolic factor98.64100.00NP_391078
IBMOCDID_131630103170146dhbF0.0BacillibactinNutritional/Metabolic factor98.52100.00NP_391076

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IBMOCDID_1132339133475tufA0.0elongation factor Tu85.7595.69AHM69299
IBMOCDID_11860219471pdxS3.07e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
IBMOCDID_117283281729104CodY3.35e-124nutrient-responsive regulator81.08100.00ACJ80679
IBMOCDID_134601443460713ClpP2.49e-98part of proteolytic complex81.0597.44BAB94595